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    eef1a1o eukaryotic translation elongation factor 1 alpha 1, oocyte form [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 394920, updated on 17-Aug-2024

    Summary

    Official Symbol
    eef1a1oprovided by Xenbase
    Official Full Name
    eukaryotic translation elongation factor 1 alpha 1, oocyte formprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-1218983
    See related
    Ensembl:ENSXETG00000022604
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    EF-1aO; xef1ao
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    Genomic context

    See eef1a1o in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    104 current UCB_Xtro_10.0 (GCF_000004195.4) 2 NC_030678.2 (90792049..90796770, complement)
    103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 2 NC_030678.1 (86666168..86670890, complement)

    Chromosome 2 - NC_030678.2Genomic Context describing neighboring genes Neighboring gene elongin A Neighboring gene ribosomal protein L11 Neighboring gene palmitoyl-protein thioesterase 1 Neighboring gene cyclase associated actin cytoskeleton regulatory protein 1

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Clone Names

    • MGC75658

    Gene Ontology Provided by Xenbase

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables metalloendopeptidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables translation elongation factor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in proteolysis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within translational elongation IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    eukaryotic translation elongation factor 1 alpha 1, oocyte form

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_203970.3NP_989301.1  eukaryotic translation elongation factor 1 alpha 1, oocyte form

      See identical proteins and their annotated locations for NP_989301.1

      Status: VALIDATED

      Source sequence(s)
      AL786241, BC064177, BC158425
      UniProtKB/TrEMBL
      A0A1B8XTA2, Q6P356
      Related
      ENSXETP00000048899.3, ENSXETT00000048899.5
      Conserved Domains (1) summary
      PTZ00141
      Location:1461
      PTZ00141; elongation factor 1- alpha; Provisional

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UCB_Xtro_10.0 Primary Assembly

    Genomic

    1. NC_030678.2 Reference UCB_Xtro_10.0 Primary Assembly

      Range
      90792049..90796770 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)