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    CheB53b Chemosensory protein B 53b [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 3346204, updated on 11-Sep-2024

    Summary

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    Official Symbol
    CheB53bprovided by FlyBase
    Official Full Name
    Chemosensory protein B 53bprovided by FlyBase
    Primary source
    FLYBASE:FBgn0261293
    Locus tag
    Dmel_CG33524
    See related
    AllianceGenome:FB:FBgn0261293
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG33457; CG33524; Dmel\CG33524
    Summary
    Predicted to enable lipid binding activity. Involved in detection of pheromone. Predicted to be located in extracellular space. Is expressed in prothoracic leg. [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    all
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    Genomic context

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    See CheB53b in Genome Data Viewer
    Location:
    53C5-53C5; 2-80 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2R NT_033778.4 (16468209..16468934)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2R NT_033778.3 (12355714..12356439)

    Chromosome 2R - NT_033778.4Genomic Context describing neighboring genes Neighboring gene Poly(ADP-ribose) polymerase 16 Neighboring gene Chemosensory protein B 53a Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A Drosophila protein family implicated in pheromone perception is related to Tay-Sachs GM2-activator protein. Starostina E, et al. J Biol Chem, 2009 Jan 2. PMID 18952610, Free PMC Article
    2. Novel genes expressed in subsets of chemosensory sensilla on the front legs of male Drosophila melanogaster. Xu A, et al. Cell Tissue Res, 2002 Mar. PMID 11904775
    3. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article
    4. Transcription elongation rate has a tissue-specific impact on alternative cleavage and polyadenylation in Drosophila melanogaster. Liu X, et al. RNA, 2017 Dec. PMID 28851752, Free PMC Article
    5. The Release 6 reference sequence of the Drosophila melanogaster genome. Hoskins RA, et al. Genome Res, 2015 Mar. PMID 25589440, Free PMC Article

    See all (16) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables lipid binding ISA
    Inferred from Sequence Alignment
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in detection of pheromone IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in sensory perception of chemical stimulus ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    located_in extracellular space ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    chemosensory protein B 53b
    Names
    CG33524-PA
    CheB53b-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033778.4 Reference assembly

      Range
      16468209..16468934
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001014531.1 → NP_001014531.1  chemosensory protein B 53b [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001014531.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A1ZAG6, Q6IGB4
      Conserved Domains (1) summary
      smart00675
      Location:25 → 183
      DM11; Domains in hypothetical proteins in Drosophila including 2 in CG15241 and CG9329
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A1ZAG6 A1ZAG6

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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