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    Muc96D Mucin 96D [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 318737, updated on 11-Sep-2024

    Summary

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    Official Symbol
    Muc96Dprovided by FlyBase
    Official Full Name
    Mucin 96Dprovided by FlyBase
    Primary source
    FLYBASE:FBgn0051439
    Locus tag
    Dmel_CG31439
    See related
    AllianceGenome:FB:FBgn0051439
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    CG31439; Dmel\CG31439
    Summary
    Predicted to be an extracellular matrix structural constituent. Predicted to be located in extracellular matrix. Is expressed in embryonic/larval proventriculus; embryonic/larval salivary gland; and organism. [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
    all
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    Genomic context

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    See Muc96D in Genome Data Viewer
    Location:
    96D4-96D4; 3-87 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (25397788..25400645, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (21223510..21226367, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Furin 1 Neighboring gene uncharacterized protein Neighboring gene astrocytic leucine-rich repeat molecule Neighboring gene Vacuolar protein sorting 33B Neighboring gene uncharacterized protein Neighboring gene Mediator complex subunit 28

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A potential role for Drosophila mucins in development and physiology. Syed ZA, et al. PLoS One, 2008 Aug 22. PMID 18725942, Free PMC Article
    2. Micro-RNA Clusters Integrate Evolutionary Constraints on Expression and Target Affinities: The miR-6/5/4/286/3/309 Cluster in Drosophila. Zhe Q, et al. Mol Biol Evol, 2020 Oct 1. PMID 32521021
    3. p120 catenin is required for the stress response in Drosophila. Stefanatos RK, et al. PLoS One, 2013. PMID 24349561, Free PMC Article
    4. mRNA-Associated Processes and Their Influence on Exon-Intron Structure in Drosophila melanogaster. Lepennetier G, et al. G3 (Bethesda), 2016 Jun 1. PMID 27172210, Free PMC Article
    5. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article

    See all (18) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables chitin binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables extracellular matrix structural constituent ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular matrix ISM
    Inferred from Sequence Model
    more info
    		 PubMed 
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    mucin 96D
    Names
    CG31439-PA
    Muc96D-PA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      25397788..25400645 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_170227.3 → NP_733106.2  mucin 96D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_733106.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IMS9
      Related
      FBpp0084219
      Conserved Domains (2) summary
      smart00494
      Location:29 → 72
      ChtBD2; Chitin-binding domain type 2
      pfam01607
      Location:827 → 875
      CBM_14; Chitin binding Peritrophin-A domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8IMS9 Q8IMS9

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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