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    Aadacl4 arylacetamide deacetylase-like 4 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 313688, updated on 28-Oct-2024

    Summary

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    Official Symbol
    Aadacl4provided by RGD
    Official Full Name
    arylacetamide deacetylase-like 4provided by RGD
    Primary source
    RGD:1565761
    See related
    EnsemblRapid:ENSRNOG00000037030 AllianceGenome:RGD:1565761
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1565761
    Summary
    Predicted to enable hydrolase activity. Predicted to be located in membrane. Orthologous to human AADACL4 (arylacetamide deacetylase like 4). [provided by Alliance of Genome Resources, Oct 2024]
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See Aadacl4 in Genome Data Viewer
    Location:
    5q36
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (161797029..161807851, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (156514021..156524567, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (162676109..162688907, complement)

    Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L9 pseudogene Neighboring gene AADACL4 family member 1 Neighboring gene AADACL4 family member 2 Neighboring gene AADACL4 family member 3 Neighboring gene AADACL4 family member 3 like 1 Neighboring gene solute carrier family 50 member 1, pseudogene 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    arylacetamide deacetylase-like 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086023.1 Reference GRCr8

      Range
      161797029..161807851 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_233640.7 → XP_233640.4  arylacetamide deacetylase-like 4

      See identical proteins and their annotated locations for XP_233640.4

      UniProtKB/TrEMBL
      D3ZTU9
      Related
      ENSRNOP00000032161.5, ENSRNOT00000034394.8
      Conserved Domains (2) summary
      COG0657
      Location:97 → 378
      Aes; Acetyl esterase/lipase [Lipid transport and metabolism]
      cl21494
      Location:115 → 380
      Abhydrolase; alpha/beta hydrolases
    Nucleotide Protein Strain
    Heading Accession and Version

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