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    Actl7b actin-like 7b [ Rattus norvegicus (Norway rat) ]

    Gene ID: 313183, updated on 2-Nov-2024

    Summary

    Official Symbol
    Actl7bprovided by RGD
    Official Full Name
    actin-like 7bprovided by RGD
    Primary source
    RGD:1305655
    See related
    EnsemblRapid:ENSRNOG00000016621 AllianceGenome:RGD:1305655
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to be located in cytoskeleton. Predicted to be active in actin cytoskeleton; cytoplasm; and nucleus. Orthologous to human ACTL7B (actin like 7B). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
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    Genomic context

    See Actl7b in Genome Data Viewer
    Location:
    5q24
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (76240739..76242127, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (71445532..71446920, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (73492642..73494030, complement)

    Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene SEC24 homolog C, COPII coat complex component, pseudogene 1 Neighboring gene uncharacterized LOC102553455 Neighboring gene actin-like 7a Neighboring gene elongator acetyltransferase complex subunit 1

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Gene Ontology Provided by RGD

    Component Evidence Code Pubs
    is_active_in actin cytoskeleton IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in cytoplasm ISO
    Inferred from Sequence Orthology
    more info
     
    located_in cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001025417.1NP_001020588.1  actin-like protein 7B

      See identical proteins and their annotated locations for NP_001020588.1

      Status: PROVISIONAL

      Source sequence(s)
      BC097412
      UniProtKB/Swiss-Prot
      Q4QR76
      UniProtKB/TrEMBL
      A6KDR2
      Related
      ENSRNOP00000022291.1, ENSRNOT00000022291.5
      Conserved Domains (1) summary
      smart00268
      Location:51417
      ACTIN; Actin

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086023.1 Reference GRCr8

      Range
      76240739..76242127 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)