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    Gpx7 glutathione peroxidase 7 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 298376, updated on 2-Nov-2024

    Summary

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    Official Symbol
    Gpx7provided by RGD
    Official Full Name
    glutathione peroxidase 7provided by RGD
    Primary source
    RGD:1306999
    See related
    EnsemblRapid:ENSRNOG00000009751 AllianceGenome:RGD:1306999
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Summary
    Predicted to enable catalase activity. Predicted to be involved in cellular oxidant detoxification and response to oxidative stress. Predicted to be located in endoplasmic reticulum. Human ortholog(s) of this gene implicated in Barrett's adenocarcinoma and Barrett's esophagus. Orthologous to human GPX7 (glutathione peroxidase 7). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in Lung (RPKM 170.1), Heart (RPKM 111.6) and 9 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See Gpx7 in Genome Data Viewer
    Location:
    5q34
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (128373881..128381866, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (123145151..123153141, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (128001766..128009610, complement)

    Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase assembly factor 7 Neighboring gene shisa like 2A Neighboring gene terminal uridylyl transferase 4 Neighboring gene ribosomal protein L9, pseudogene 7 Neighboring gene 40S ribosomal protein S27-like Neighboring gene small nucleolar RNA SNORA40

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    Related articles in PubMed

    1. ER-resident antioxidative GPx7 and GPx8 enzyme isoforms protect insulin-secreting INS-1E β-cells against lipotoxicity by improving the ER antioxidative capacity. Mehmeti I, et al. Free Radic Biol Med, 2017 Nov. PMID 28751022
    2. Glutathione peroxidase 7 protects against oxidative DNA damage in oesophageal cells. Peng D, et al. Gut, 2012 Sep. PMID 22157330, Free PMC Article
    3. DNA hypermethylation regulates the expression of members of the Mu-class glutathione S-transferases and glutathione peroxidases in Barrett's adenocarcinoma. Peng DF, et al. Gut, 2009 Jan. PMID 18664505, Free PMC Article
    4. Two endoplasmic reticulum PDI peroxidases increase the efficiency of the use of peroxide during disulfide bond formation. Nguyen VD, et al. J Mol Biol, 2011 Feb 25. PMID 21215271
    5. Glutathione Peroxidase gpx1 to gpx8 Genes Expression in Experimental Brain Tumors Reveals Gender-Dependent Patterns. Cueto-Ureña C, et al. Genes (Basel), 2023 Aug 24. PMID 37761814, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Glutathione Peroxidase gpx1 to gpx8 Genes Expression in Experimental Brain Tumors Reveals Gender-Dependent Patterns.
      Title: Glutathione Peroxidase gpx1 to gpx8 Genes Expression in Experimental Brain Tumors Reveals Gender-Dependent Patterns.
    2. Endoplasmic reticulum (ER)-resident antioxidative GPx7 and GPx8 enzyme isoforms protect insulin-secreting beta-cells against lipotoxicity by improving the ER antioxidative capacity.
      Title: ER-resident antioxidative GPx7 and GPx8 enzyme isoforms protect insulin-secreting INS-1E β-cells against lipotoxicity by improving the ER antioxidative capacity.
    Submit: New GeneRIF Correction

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    enables catalase activity ISO
    Inferred from Sequence Orthology
    more info
    		  
    enables glutathione peroxidase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables peroxidase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    enables peroxidase activity ISO
    Inferred from Sequence Orthology
    more info
    		  
    Process Evidence Code Pubs
    involved_in cellular oxidant detoxification IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in response to oxidative stress IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in endoplasmic reticulum ISO
    Inferred from Sequence Orthology
    more info
    		  

    General protein information

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    Preferred Names
    glutathione peroxidase 7
    NP_001100143.1
    XP_038965504.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001106673.1 → NP_001100143.1  glutathione peroxidase 7 precursor

      See identical proteins and their annotated locations for NP_001100143.1

      Status: PROVISIONAL

      Source sequence(s)
      CH474008
      UniProtKB/TrEMBL
      A0A8I6ARN0, A6JYU9, D3ZQI1
      Related
      ENSRNOP00000013913.5, ENSRNOT00000013913.8
      Conserved Domains (1) summary
      TIGR02540
      Location:23 → 175
      gpx7; putative glutathione peroxidase Gpx7

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086023.1 Reference GRCr8

      Range
      128373881..128381866 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_039109576.2 → XP_038965504.1  glutathione peroxidase 7 isoform X1

      Conserved Domains (1) summary
      cl00388
      Location:23 → 133
      Thioredoxin_like; Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold
    Nucleotide Protein Strain
    Heading Accession and Version

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