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    VEGFD vascular endothelial growth factor D [ Bos taurus (domestic cattle) ]

    Gene ID: 286799, updated on 4-Oct-2024

    Summary

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    Official Symbol
    VEGFDprovided by VGNC
    Official Full Name
    vascular endothelial growth factor Dprovided by VGNC
    Primary source
    VGNC:VGNC:36786
    See related
    BGD:BT12327; Ensembl:ENSBTAG00000009476
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    FIGF; VEGF-D
    Orthologs
    human mouse all
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    Genomic context

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    See VEGFD in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) X NC_037357.1 (128109138..128156019)

    Chromosome X - NC_037357.1Genomic Context describing neighboring genes Neighboring gene BMX non-receptor tyrosine kinase Neighboring gene transcription factor E2F6-like Neighboring gene pirin Neighboring gene phosphatidylinositol glycan anchor biosynthesis class A Neighboring gene ankyrin repeat and SOCS box containing 11

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037357.1 Chromosome X Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The urokinase plasminogen activator system components are regulated by vascular endothelial growth factor D in bovine oviduct. García DC, et al. Zygote, 2018 Jun. PMID 29880066
    2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. VEGF-D expression in the oviducts.
      Title: The urokinase plasminogen activator system components are regulated by vascular endothelial growth factor D in bovine oviduct.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chemoattractant activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables growth factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables vascular endothelial growth factor receptor 3 binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in induction of positive chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of angiogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of endothelial cell proliferation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of mast cell chemotaxis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to hypoxia IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sprouting angiogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vascular endothelial growth factor receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vascular endothelial growth factor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    vascular endothelial growth factor D
    Names
    c-fos induced growth factor (vascular endothelial growth factor D)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001101043.2 → NP_001094513.1  vascular endothelial growth factor D precursor

      See identical proteins and their annotated locations for NP_001094513.1

      Status: PROVISIONAL

      Source sequence(s)
      BC151466
      UniProtKB/TrEMBL
      A0A3Q1MTW6, A7MBB6
      Related
      ENSBTAP00000012474.4, ENSBTAT00000012474.6
      Conserved Domains (1) summary
      smart00141
      Location:109 → 193
      PDGF; Platelet-derived and vascular endothelial growth factors (PDGF, VEGF) family

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037357.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      128109138..128156019
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005228423.5 → XP_005228480.1  vascular endothelial growth factor D isoform X1

      UniProtKB/TrEMBL
      A0A3Q1LXH6, A0A3Q1MTW6
      Related
      ENSBTAP00000065472.1, ENSBTAT00000066602.2
      Conserved Domains (1) summary
      smart00141
      Location:109 → 193
      PDGF; Platelet-derived and vascular endothelial growth factors (PDGF, VEGF) family
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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