U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    LOC281287 lysozyme 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 281287, updated on 4-Oct-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC281287
    Gene description
    lysozyme 1
    See related
    BGD:BT10322; Ensembl:ENSBTAG00000011941
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    LYZ1; LYZF1; lysozyme
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC281287 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (44119610..44125565, complement)

    Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene fibroblast growth factor receptor substrate 2 Neighboring gene E3 ubiquitin-protein ligase MARCHF6-like Neighboring gene YEATS domain containing 4 Neighboring gene U5 spliceosomal RNA Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Restriction fragment length polymorphism of bovine lysozyme genes. Sigurdardóttir S, et al. Anim Genet, 1990. PMID 1980052
    2. Evolution of cow nonstomach lysozyme genes. Irwin DM. Genome, 2004 Dec. PMID 15644966

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables lysozyme activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in defense response to Gram-negative bacterium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in defense response to Gram-positive bacterium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    lysozyme C, milk isozyme
    Names
    1,4-beta-N-acetylmuramidase C
    lysozyme F1
    NP_001071297.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001077829.1 → NP_001071297.1  lysozyme C, milk isozyme precursor

      See identical proteins and their annotated locations for NP_001071297.1

      Status: PROVISIONAL

      Source sequence(s)
      AY684064
      UniProtKB/Swiss-Prot
      Q6B411
      UniProtKB/TrEMBL
      A0A077S9Q3
      Related
      ENSBTAP00000015846.4, ENSBTAT00000015846.5
      Conserved Domains (1) summary
      smart00263
      Location:19 → 147
      LYZ1; Alpha-lactalbumin / lysozyme C

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      44119610..44125565 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P04421.2 GenPept UniProtKB/Swiss-Prot:P04421
    Q6B411.1 GenPept UniProtKB/Swiss-Prot:Q6B411

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.