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    Aurkc aurora kinase C [ Mus musculus (house mouse) ]

    Gene ID: 20871, updated on 2-Nov-2024

    Summary

    Official Symbol
    Aurkcprovided by MGI
    Official Full Name
    aurora kinase Cprovided by MGI
    Primary source
    MGI:MGI:1321119
    See related
    Ensembl:ENSMUSG00000070837 AllianceGenome:MGI:1321119
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    AIE1; AIK3; IAK3; ARK-3; Stk13
    Summary
    Enables protein kinase activity. Acts upstream of or within protein autophosphorylation. Located in chromosome, centromeric region and meiotic spindle midzone. Is expressed in brain; gonad; heart; liver; and metanephros. Human ortholog(s) of this gene implicated in spermatogenic failure 5. Orthologous to human AURKC (aurora kinase C). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in testis adult (RPKM 2.8), ovary adult (RPKM 0.2) and 1 other tissue See more
    Orthologs
    NEW
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    Genomic context

    See Aurkc in Genome Data Viewer
    Location:
    7 A1; 7 4.06 cM
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (6998346..7006090)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (6995347..7003091)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 29 Neighboring gene STARR-seq mESC enhancer starr_17992 Neighboring gene zinc finger, imprinted 3 Neighboring gene STARR-seq mESC enhancer starr_17994 Neighboring gene zinc finger protein 264 Neighboring gene STARR-seq mESC enhancer starr_17995 Neighboring gene STARR-seq mESC enhancer starr_17996 Neighboring gene STARR-seq mESC enhancer starr_17997 Neighboring gene STARR-seq mESC enhancer starr_17999 Neighboring gene platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit, pseudogene 2 Neighboring gene STARR-seq mESC enhancer starr_18000 Neighboring gene ARP2 actin-related protein 2 homolog pseudogene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
     
    enables histone H2AS1 kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    enables protein kinase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables protein kinase activity ISO
    Inferred from Sequence Orthology
    more info
     
    enables protein kinase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    enables protein serine kinase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in cell division IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in chromatin remodeling IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in meiotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in mitotic spindle organization IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within protein autophosphorylation IDA
    Inferred from Direct Assay
    more info
    PubMed 
    involved_in protein phosphorylation ISO
    Inferred from Sequence Orthology
    more info
     
    involved_in protein phosphorylation ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    involved_in regulation of cytokinesis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in centrosome IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in chromosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of chromosome passenger complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in chromosome, centromeric region IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in condensed chromosome ISO
    Inferred from Sequence Orthology
    more info
     
    located_in condensed chromosome ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in kinetochore IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in meiotic spindle midzone IDA
    Inferred from Direct Assay
    more info
    PubMed 
    is_active_in midbody IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in midbody ISO
    Inferred from Sequence Orthology
    more info
     
    located_in midbody ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    is_active_in spindle microtubule IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    is_active_in spindle midzone IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in spindle midzone ISO
    Inferred from Sequence Orthology
    more info
     
    located_in spindle midzone ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    is_active_in spindle pole IBA
    Inferred from Biological aspect of Ancestor
    more info
     

    General protein information

    Preferred Names
    aurora kinase C
    Names
    aurora 3
    aurora B
    aurora-related kinase 3
    aurora/IPL1-related kinase 3
    aurora/Ipl1/Eg2 protein 1
    serine/threonine kinase 13 (aurora/IPL-like)
    serine/threonine-protein kinase 13
    serine/threonine-protein kinase aurora-C
    NP_001074434.2
    NP_001074435.1
    NP_065597.2
    XP_006539760.1
    XP_006539764.1
    XP_017177568.1

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001080965.2NP_001074434.2  aurora kinase C

      Status: VALIDATED

      Source sequence(s)
      AC152418
      UniProtKB/Swiss-Prot
      O88445, Q6P209, Q9JLC2
      Related
      ENSMUSP00000083426.7, ENSMUST00000086248.8
    2. NM_001080966.2NP_001074435.1  aurora kinase C

      See identical proteins and their annotated locations for NP_001074435.1

      Status: VALIDATED

      Source sequence(s)
      AC152418
      Consensus CDS
      CCDS85211.1
      UniProtKB/Swiss-Prot
      O88445, Q6P209, Q9JLC2
      UniProtKB/TrEMBL
      Q497X5
      Related
      ENSMUSP00000146450.2, ENSMUST00000207711.2
      Conserved Domains (1) summary
      cl21453
      Location:9275
      PKc_like; Protein Kinases, catalytic domain
    3. NM_020572.3NP_065597.2  aurora kinase C

      See identical proteins and their annotated locations for NP_065597.2

      Status: VALIDATED

      Source sequence(s)
      AC152418
      Consensus CDS
      CCDS85211.1
      UniProtKB/Swiss-Prot
      O88445, Q6P209, Q9JLC2
      UniProtKB/TrEMBL
      Q497X5
      Related
      ENSMUSP00000147207.2, ENSMUST00000208049.2
      Conserved Domains (1) summary
      cl21453
      Location:9275
      PKc_like; Protein Kinases, catalytic domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      6998346..7006090
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017322079.1XP_017177568.1  aurora kinase C isoform X1

      UniProtKB/Swiss-Prot
      O88445, Q6P209, Q9JLC2
      UniProtKB/TrEMBL
      Q497X5
      Conserved Domains (1) summary
      cl21453
      Location:9275
      PKc_like; Protein Kinases, catalytic domain
    2. XM_006539697.3XP_006539760.1  aurora kinase C isoform X1

      See identical proteins and their annotated locations for XP_006539760.1

      UniProtKB/Swiss-Prot
      O88445, Q6P209, Q9JLC2
      UniProtKB/TrEMBL
      Q497X5
      Conserved Domains (1) summary
      cl21453
      Location:9275
      PKc_like; Protein Kinases, catalytic domain
    3. XM_006539701.3XP_006539764.1  aurora kinase C isoform X1

      See identical proteins and their annotated locations for XP_006539764.1

      UniProtKB/Swiss-Prot
      O88445, Q6P209, Q9JLC2
      UniProtKB/TrEMBL
      Q497X5
      Conserved Domains (1) summary
      cl21453
      Location:9275
      PKc_like; Protein Kinases, catalytic domain