U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    ttr-24 DUF4150 domain-containing protein;TransThyretin-Related family domain [ Caenorhabditis elegans ]

    Gene ID: 180209, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    ttr-24
    Official Full Name
    DUF4150 domain-containing protein;TransThyretin-Related family domain
    Primary source
    WormBase:WBGene00013077
    Locus tag
    CELE_Y51A2D.9
    See related
    AllianceGenome:WB:WBGene00013077
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in cell surface and extracellular region. [provided by Alliance of Genome Resources, Apr 2022]
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ttr-24 in Genome Data Viewer
    Location:
    chromosome: V
    Exon count:
    3
    Sequence:
    Chromosome: V; NC_003283.11 (18555387..18556643, complement)

    Chromosome V - NC_003283.11Genomic Context describing neighboring genes Neighboring gene Integrator complex subunit 5 Neighboring gene Cysteine proteinase Neighboring gene TransThyretin-Related family domain Neighboring gene Transthyretin-like family protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003283.11

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Cell size and fat content of dietary-restricted Caenorhabditis elegans are regulated by ATX-2, an mTOR repressor. Bar DZ, et al. Proc Natl Acad Sci U S A, 2016 Aug 9. PMID 27457958, Free PMC Article
    2. Distinct patterns of gene and protein expression elicited by organophosphorus pesticides in Caenorhabditis elegans. Lewis JA, et al. BMC Genomics, 2009 Apr 29. PMID 19402892, Free PMC Article
    3. Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Simonis N, et al. Nat Methods, 2009 Jan. PMID 19123269, Free PMC Article
    4. Novel LOTUS-domain proteins are organizational hubs that recruit C. elegans Vasa to germ granules. Cipriani PG, et al. Elife, 2021 Jul 5. PMID 34223818, Free PMC Article
    5. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in cell surface IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    DUF4150 domain-containing protein;TransThyretin-Related family domain
    NP_001256812.1
    • Confirmed by transcript evidence
    NP_001256813.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003283.11 Reference assembly

      Range
      18555387..18556643 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001269883.3 → NP_001256812.1  TransThyretin-Related family domain [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256812.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XXR4
      Conserved Domains (1) summary
      pfam01060
      Location:32 → 107
      TTR-52; Transthyretin-like family

    2. NM_001269884.3 → NP_001256813.1  DUF4150 domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001256813.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      H2KMI9
      Conserved Domains (1) summary
      pfam01060
      Location:1 → 49
      TTR-52; Transthyretin-like family
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools