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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001301737.1 → NP_001288666.1 dynamin-1 isoform 2
See identical proteins and their annotated locations for NP_001288666.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) has multiple differences in the coding region, one of which results in a frameshift, compared to variant 1. The resulting protein (isoform 2) has a distinct C-terminus and is shorter than isoform 1. This variant contains the alternate "a" exon in the central coding region and the "b" splicing pattern in the 3' coding region (PMID:10398046, PMID:20700442).
- Source sequence(s)
-
AK011651, AL808027, BC034679, BQ179370, BY297150, CA328097, CO425806
- Consensus CDS
-
CCDS79772.1
- UniProtKB/Swiss-Prot
- A2AN50, A2AN51, A2AN54, A2AN55, P39053, Q3UNM1, Q5DTN7, Q61358, Q61359, Q61360, Q6PDM5, Q8JZZ4, Q9CSY7, Q9QXX1
- Related
- ENSMUSP00000077461.6, ENSMUST00000078352.12
- Conserved Domains (5) summary
-
- smart00053
Location:6 → 245
- DYNc; Dynamin, GTPase
- PHA03378
Location:752 → 844
- PHA03378; EBNA-3B; Provisional
- cd01256
Location:520 → 629
- PH_dynamin; Dynamin pleckstrin homology (PH) domain
- pfam01031
Location:216 → 502
- Dynamin_M; Dynamin central region
- pfam02212
Location:657 → 745
- GED; Dynamin GTPase effector domain
-
NM_001368679.1 → NP_001355608.1 dynamin-1 isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) contains two alternate exons in the mid-coding region and uses an alternate acceptor splice site at the 3' terminal exon compared to variant one. The resulting isoform (3) is longer than isoform 1.
- Source sequence(s)
-
AL808027
- UniProtKB/Swiss-Prot
- A2AN50, A2AN51, A2AN54, A2AN55, P39053, Q3UNM1, Q5DTN7, Q61358, Q61359, Q61360, Q6PDM5, Q8JZZ4, Q9CSY7, Q9QXX1
- Conserved Domains (5) summary
-
- smart00053
Location:6 → 245
- DYNc; Dynamin, GTPase
- PHA03378
Location:752 → 863
- PHA03378; EBNA-3B; Provisional
- cd01256
Location:520 → 629
- PH_dynamin; Dynamin pleckstrin homology (PH) domain
- pfam01031
Location:216 → 502
- Dynamin_M; Dynamin central region
- pfam02212
Location:656 → 745
- GED; Dynamin GTPase effector domain
-
NM_010065.3 → NP_034195.2 dynamin-1 isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (1). This variant contains the alternate "b" exon in the central coding region and the "a" splicing pattern in the 3' coding region (PMID:10398046, PMID:20700442).
- Source sequence(s)
-
AA387428, AI894003, AK011651, BC058623, BE860433, BM950315, BY297150, CX239206
- Consensus CDS
-
CCDS38102.1
- UniProtKB/Swiss-Prot
- A2AN50, A2AN51, A2AN54, A2AN55, P39053, Q3UNM1, Q5DTN7, Q61358, Q61359, Q61360, Q6PDM5, Q8JZZ4, Q9CSY7, Q9QXX1
- Related
- ENSMUSP00000088618.6, ENSMUST00000091089.12
- Conserved Domains (5) summary
-
- smart00053
Location:6 → 245
- DYNc; Dynamin, GTPase
- cd01256
Location:514 → 625
- PH_dynamin; Dynamin pleckstrin homology (PH) domain
- pfam01031
Location:216 → 501
- Dynamin_M; Dynamin central region
- pfam02212
Location:653 → 741
- GED; Dynamin GTPase effector domain
- cl26464
Location:743 → 860
- Atrophin-1; Atrophin-1 family
RNA
-
NR_125959.1 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) contains two alternate exons in the central region and uses an alternate splice site in the 3' terminal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most supported translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD). This variant contains the alternate "b" exon in the central region (PMID:20700442).
- Source sequence(s)
-
BC034679, BY297150
- Related
-
ENSMUST00000139624.8
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000068.8 Reference GRCm39 C57BL/6J
- Range
-
32198483..32243361 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006497654.4 → XP_006497717.2 dynamin-1 isoform X4
See identical proteins and their annotated locations for XP_006497717.2
- UniProtKB/TrEMBL
- A0A0J9YUE9, A0A0J9YUN4
- Related
- ENSMUSP00000144264.2, ENSMUST00000201433.4
- Conserved Domains (5) summary
-
- smart00053
Location:6 → 245
- DYNc; Dynamin, GTPase
- PHA03247
Location:747 → 844
- PHA03247; large tegument protein UL36; Provisional
- cd01256
Location:520 → 629
- PH_dynamin; Dynamin pleckstrin homology (PH) domain
- pfam01031
Location:216 → 502
- Dynamin_M; Dynamin central region
- pfam02212
Location:657 → 745
- GED; Dynamin GTPase effector domain
-
XM_006497649.3 → XP_006497712.2 dynamin-1 isoform X1
- UniProtKB/Swiss-Prot
- A2AN50, A2AN51, A2AN54, A2AN55, P39053, Q3UNM1, Q5DTN7, Q61358, Q61359, Q61360, Q6PDM5, Q8JZZ4, Q9CSY7, Q9QXX1
- Conserved Domains (5) summary
-
- smart00053
Location:6 → 245
- DYNc; Dynamin, GTPase
- PHA03247
Location:747 → 864
- PHA03247; large tegument protein UL36; Provisional
- cd01256
Location:520 → 629
- PH_dynamin; Dynamin pleckstrin homology (PH) domain
- pfam01031
Location:216 → 502
- Dynamin_M; Dynamin central region
- pfam02212
Location:656 → 745
- GED; Dynamin GTPase effector domain
-
XM_006497659.4 → XP_006497722.2 dynamin-1 isoform X7
See identical proteins and their annotated locations for XP_006497722.2
- UniProtKB/Swiss-Prot
- A2AN50, A2AN51, A2AN54, A2AN55, P39053, Q3UNM1, Q5DTN7, Q61358, Q61359, Q61360, Q6PDM5, Q8JZZ4, Q9CSY7, Q9QXX1
- Conserved Domains (5) summary
-
- smart00053
Location:6 → 245
- DYNc; Dynamin, GTPase
- PHA03378
Location:752 → 844
- PHA03378; EBNA-3B; Provisional
- cd01256
Location:520 → 629
- PH_dynamin; Dynamin pleckstrin homology (PH) domain
- pfam01031
Location:216 → 502
- Dynamin_M; Dynamin central region
- pfam02212
Location:657 → 745
- GED; Dynamin GTPase effector domain
-
XM_006497655.4 → XP_006497718.2 dynamin-1 isoform X5
- UniProtKB/TrEMBL
-
A0A0J9YUE9
- Related
- ENSMUSP00000108992.2, ENSMUST00000113365.8
- Conserved Domains (5) summary
-
- smart00053
Location:6 → 245
- DYNc; Dynamin, GTPase
- PHA03247
Location:747 → 844
- PHA03247; large tegument protein UL36; Provisional
- cd01256
Location:520 → 629
- PH_dynamin; Dynamin pleckstrin homology (PH) domain
- pfam01031
Location:216 → 502
- Dynamin_M; Dynamin central region
- pfam02212
Location:657 → 745
- GED; Dynamin GTPase effector domain
-
XM_036158081.1 → XP_036013974.1 dynamin-1 isoform X3
- UniProtKB/Swiss-Prot
- A2AN50, A2AN51, A2AN54, A2AN55, P39053, Q3UNM1, Q5DTN7, Q61358, Q61359, Q61360, Q6PDM5, Q8JZZ4, Q9CSY7, Q9QXX1
- Conserved Domains (5) summary
-
- smart00053
Location:6 → 245
- DYNc; Dynamin, GTPase
- PHA03378
Location:752 → 863
- PHA03378; EBNA-3B; Provisional
- cd01256
Location:520 → 629
- PH_dynamin; Dynamin pleckstrin homology (PH) domain
- pfam01031
Location:216 → 502
- Dynamin_M; Dynamin central region
- pfam02212
Location:657 → 745
- GED; Dynamin GTPase effector domain
-
XM_006497661.3 → XP_006497724.2 dynamin-1 isoform X8
- UniProtKB/Swiss-Prot
- A2AN50, A2AN51, A2AN54, A2AN55, P39053, Q3UNM1, Q5DTN7, Q61358, Q61359, Q61360, Q6PDM5, Q8JZZ4, Q9CSY7, Q9QXX1
- Related
- ENSMUSP00000108977.2, ENSMUST00000113350.8
- Conserved Domains (5) summary
-
- smart00053
Location:6 → 245
- DYNc; Dynamin, GTPase
- PHA03378
Location:752 → 844
- PHA03378; EBNA-3B; Provisional
- cd01256
Location:520 → 629
- PH_dynamin; Dynamin pleckstrin homology (PH) domain
- pfam01031
Location:216 → 502
- Dynamin_M; Dynamin central region
- pfam02212
Location:657 → 745
- GED; Dynamin GTPase effector domain
-
XM_006497653.4 → XP_006497716.2 dynamin-1 isoform X6
- UniProtKB/Swiss-Prot
- A2AN50, A2AN51, A2AN54, A2AN55, P39053, Q3UNM1, Q5DTN7, Q61358, Q61359, Q61360, Q6PDM5, Q8JZZ4, Q9CSY7, Q9QXX1
- Conserved Domains (5) summary
-
- smart00053
Location:6 → 245
- DYNc; Dynamin, GTPase
- PHA03247
Location:743 → 860
- PHA03247; large tegument protein UL36; Provisional
- cd01256
Location:514 → 625
- PH_dynamin; Dynamin pleckstrin homology (PH) domain
- pfam01031
Location:216 → 502
- Dynamin_M; Dynamin central region
- pfam02212
Location:652 → 741
- GED; Dynamin GTPase effector domain
-
XM_006497658.4 → XP_006497721.2 dynamin-1 isoform X7
See identical proteins and their annotated locations for XP_006497721.2
- UniProtKB/Swiss-Prot
- A2AN50, A2AN51, A2AN54, A2AN55, P39053, Q3UNM1, Q5DTN7, Q61358, Q61359, Q61360, Q6PDM5, Q8JZZ4, Q9CSY7, Q9QXX1
- Related
- ENSMUSP00000143955.2, ENSMUST00000202578.4
- Conserved Domains (5) summary
-
- smart00053
Location:6 → 245
- DYNc; Dynamin, GTPase
- PHA03378
Location:752 → 844
- PHA03378; EBNA-3B; Provisional
- cd01256
Location:520 → 629
- PH_dynamin; Dynamin pleckstrin homology (PH) domain
- pfam01031
Location:216 → 502
- Dynamin_M; Dynamin central region
- pfam02212
Location:657 → 745
- GED; Dynamin GTPase effector domain
-
XM_006497650.4 → XP_006497713.2 dynamin-1 isoform X2
- UniProtKB/Swiss-Prot
- A2AN50, A2AN51, A2AN54, A2AN55, P39053, Q3UNM1, Q5DTN7, Q61358, Q61359, Q61360, Q6PDM5, Q8JZZ4, Q9CSY7, Q9QXX1
- Conserved Domains (5) summary
-
- smart00053
Location:6 → 245
- DYNc; Dynamin, GTPase
- PHA03247
Location:747 → 864
- PHA03247; large tegument protein UL36; Provisional
- cd01256
Location:520 → 629
- PH_dynamin; Dynamin pleckstrin homology (PH) domain
- pfam01031
Location:216 → 502
- Dynamin_M; Dynamin central region
- pfam02212
Location:656 → 745
- GED; Dynamin GTPase effector domain
-
XM_017315328.2 → XP_017170817.1 dynamin-1 isoform X8
- UniProtKB/Swiss-Prot
- A2AN50, A2AN51, A2AN54, A2AN55, P39053, Q3UNM1, Q5DTN7, Q61358, Q61359, Q61360, Q6PDM5, Q8JZZ4, Q9CSY7, Q9QXX1
- Related
- ENSMUSP00000108979.3, ENSMUST00000113352.9
- Conserved Domains (5) summary
-
- smart00053
Location:6 → 245
- DYNc; Dynamin, GTPase
- PHA03378
Location:752 → 844
- PHA03378; EBNA-3B; Provisional
- cd01256
Location:520 → 629
- PH_dynamin; Dynamin pleckstrin homology (PH) domain
- pfam01031
Location:216 → 502
- Dynamin_M; Dynamin central region
- pfam02212
Location:657 → 745
- GED; Dynamin GTPase effector domain
-
XM_006497662.3 → XP_006497725.1 dynamin-1 isoform X9
- UniProtKB/Swiss-Prot
- A2AN50, A2AN51, A2AN54, A2AN55, P39053, Q3UNM1, Q5DTN7, Q61358, Q61359, Q61360, Q6PDM5, Q8JZZ4, Q9CSY7, Q9QXX1
- Conserved Domains (5) summary
-
- cd08771
Location:100 → 340
- DLP_1; Dynamin_like protein family includes dynamins and Mx proteins
- PHA03247
Location:793 → 910
- PHA03247; large tegument protein UL36; Provisional
- cd01256
Location:566 → 675
- PH_dynamin; Dynamin pleckstrin homology (PH) domain
- pfam01031
Location:262 → 548
- Dynamin_M; Dynamin central region
- pfam02212
Location:702 → 791
- GED; Dynamin GTPase effector domain
-
XM_006497660.3 → XP_006497723.2 dynamin-1 isoform X7
See identical proteins and their annotated locations for XP_006497723.2
- UniProtKB/Swiss-Prot
- A2AN50, A2AN51, A2AN54, A2AN55, P39053, Q3UNM1, Q5DTN7, Q61358, Q61359, Q61360, Q6PDM5, Q8JZZ4, Q9CSY7, Q9QXX1
- Conserved Domains (5) summary
-
- smart00053
Location:6 → 245
- DYNc; Dynamin, GTPase
- PHA03378
Location:752 → 844
- PHA03378; EBNA-3B; Provisional
- cd01256
Location:520 → 629
- PH_dynamin; Dynamin pleckstrin homology (PH) domain
- pfam01031
Location:216 → 502
- Dynamin_M; Dynamin central region
- pfam02212
Location:657 → 745
- GED; Dynamin GTPase effector domain
RNA
-
XR_374055.3 RNA Sequence
-
XR_004938046.1 RNA Sequence
-
XR_001780675.2 RNA Sequence
-
XR_004938043.1 RNA Sequence
-
XR_004938042.1 RNA Sequence
-
XR_004938044.1 RNA Sequence
-
XR_374058.5 RNA Sequence
-
XR_374057.4 RNA Sequence
-
XR_001780678.3 RNA Sequence
-
XR_003950433.2 RNA Sequence