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    Scnn1d sodium channel epithelial 1 delta subunit [ Rattus norvegicus (Norway rat) ]

    Gene ID: 103692528, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Scnn1dprovided by RGD
    Official Full Name
    sodium channel epithelial 1 delta subunitprovided by RGD
    Primary source
    RGD:9368664
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Expression
    Biased expression in Lung (RPKM 11.8), Thymus (RPKM 6.7) and 9 other tissues See more
    Orthologs
    human all
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    Genomic context

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    See Scnn1d in Genome Data Viewer
    Location:
    5q36
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 5 NC_086023.1 (171797854..171808593, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 5 NC_051340.1 (166516693..166526363, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 5 NC_005104.4 (173353515..173372559, complement)

    Chromosome 5 - NC_086023.1Genomic Context describing neighboring genes Neighboring gene integrator complex subunit 11 Neighboring gene pseudouridine synthase like 1 Neighboring gene ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 Neighboring gene ubiquitin-conjugating enzyme E2, J2 Neighboring gene C1q and TNF related 12

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    Related articles in PubMed

    1. δβγ-ENaC is inhibited by CFTR but stimulated by cAMP in Xenopus laevis oocytes. Rauh R, et al. Am J Physiol Lung Cell Mol Physiol, 2017 Feb 1. PMID 27941075

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. deltabetagamma-ENaC is inhibited by CFTR but activated by cyclic AMP.
      Title: δβγ-ENaC is inhibited by CFTR but stimulated by cAMP in Xenopus laevis oocytes.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: amiloride-sensitive sodium channel subunit delta
    Names
    sodium channel, non-voltage-gated 1, delta subunit

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086023.1 Reference GRCr8

      Range
      171797854..171808593 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063261358.1 → XP_063117428.1  LOW QUALITY PROTEIN: amiloride-sensitive sodium channel subunit delta

    Nucleotide Protein Strain
    Heading Accession and Version

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