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    LOC102723439 uncharacterized LOC102723439 [ Homo sapiens (human) ]

    Gene ID: 102723439, updated on 12-Sep-2024

    Summary

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    Gene symbol
    LOC102723439
    Gene description
    uncharacterized LOC102723439
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Broad expression in testis (RPKM 1.2), duodenum (RPKM 0.6) and 24 other tissues See more
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    Genomic context

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    Location:
    10q22.2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (74506498..74529324, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (75377977..75400800, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (76266256..76289082, complement)

    Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene adenosine kinase Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3595 Neighboring gene ribosomal protein SA pseudogene 6 Neighboring gene VISTA enhancer hs595 Neighboring gene RAB5C, member RAS oncogene family pseudogene 1 Neighboring gene mitochondrial ribosomal protein L35 pseudogene 3 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3596 Neighboring gene uncharacterized LOC124902457 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:76367924-76368771 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:76368772-76369618 Neighboring gene NADH:ubiquinone oxidoreductase subunit A8 pseudogene 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See variants in ClinVar

    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_120673.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC022540

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

      Range
      74506498..74529324 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060934.1 Alternate T2T-CHM13v2.0

      Range
      75377977..75400800 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Research Materials