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    SAG S-antigen visual arrestin [ Capra hircus (goat) ]

    Gene ID: 102189368, updated on 1-Aug-2024

    Summary

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    Gene symbol
    SAG
    Gene description
    S-antigen visual arrestin
    See related
    EnsemblRapid:ENSCHIG00000002782
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Capra hircus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
    Orthologs
    human mouse all
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    Genomic context

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    See SAG in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    102 current ASM170441v1 (GCF_001704415.1) 3 NC_030810.1 (7752538..7783407, complement)
    101 previous assembly CHIR_1.0 (GCF_000317765.1) 3 NC_022295.1 (109265049..109295853)

    Chromosome 3 - NC_030810.1Genomic Context describing neighboring genes Neighboring gene ubiquitin specific peptidase 40 Neighboring gene diacylglycerol kinase delta Neighboring gene autophagy related 16 like 1 Neighboring gene inositol polyphosphate-5-phosphatase D

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables G protein-coupled receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in G protein-coupled receptor internalization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in photoreceptor inner segment IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in photoreceptor outer segment IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    S-arrestin
    Names
    S-antigen; retina and pineal gland (arrestin)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM170441v1 Primary Assembly

    Genomic

    1. NC_030810.1 Reference ASM170441v1 Primary Assembly

      Range
      7752538..7783407 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005678742.2 → XP_005678799.1  S-arrestin isoform X1

      See identical proteins and their annotated locations for XP_005678799.1

      UniProtKB/TrEMBL
      A0A452DP50, A0A8C2Y1H7
      Related
      ENSCHIP00000001569.2, ENSCHIT00000004379.2
      Conserved Domains (2) summary
      smart01017
      Location:213 → 374
      Arrestin_C; Arrestin (or S-antigen), C-terminal domain
      pfam00339
      Location:36 → 194
      Arrestin_N; Arrestin (or S-antigen), N-terminal domain

    2. XM_005678744.3 → XP_005678801.1  S-arrestin isoform X3

      UniProtKB/TrEMBL
      A0A8C2Y1H7, A0AAJ6WJC8
      Conserved Domains (2) summary
      smart01017
      Location:199 → 360
      Arrestin_C; Arrestin (or S-antigen), C-terminal domain
      pfam00339
      Location:22 → 180
      Arrestin_N; Arrestin (or S-antigen), N-terminal domain

    3. XM_005678743.2 → XP_005678800.1  S-arrestin isoform X2

      UniProtKB/TrEMBL
      A0A8C2Y1H7, A0AAJ6WIZ0
      Conserved Domains (2) summary
      smart01017
      Location:213 → 374
      Arrestin_C; Arrestin (or S-antigen), C-terminal domain
      pfam00339
      Location:36 → 194
      Arrestin_N; Arrestin (or S-antigen), N-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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