U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    HACD4 3-hydroxyacyl-CoA dehydratase 4 [ Macaca fascicularis (crab-eating macaque) ]

    Gene ID: 102117284, updated on 7-Jun-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    HACD4
    Gene description
    3-hydroxyacyl-CoA dehydratase 4
    See related
    Ensembl:ENSMFAG00000035509
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca fascicularis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Also known as
    PTPLAD2
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See HACD4 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 15 NC_088389.1 (77857367..77882390)
    102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 15 NC_052269.1 (50733575..50759649, complement)

    Chromosome 15 - NC_088389.1Genomic Context describing neighboring genes Neighboring gene interferon omega 1 Neighboring gene interferon beta 1 Neighboring gene focadhesin Neighboring gene heterogeneous nuclear ribonucleoprotein U-like protein 1 Neighboring gene small nucleolar RNA SNORA30/SNORA37 family

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 3-hydroxyacyl-CoA dehydratase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in fatty acid elongation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sphingolipid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in very long-chain fatty acid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4
    Names
    protein tyrosine phosphatase-like A domain containing 2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference T2T-MFA8v1.0

    Genomic

    1. NC_088389.1 Reference T2T-MFA8v1.0

      Range
      77857367..77882390
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_045373318.2 → XP_045229253.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4 isoform X2

      Conserved Domains (1) summary
      pfam04387
      Location:28 → 186
      PTPLA; Protein tyrosine phosphatase-like protein, PTPLA

    2. XM_045373319.2 → XP_045229254.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4 isoform X3

      Conserved Domains (1) summary
      pfam04387
      Location:65 → 276
      PTPLA; Protein tyrosine phosphatase-like protein, PTPLA

    3. XM_005581637.4 → XP_005581694.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4 isoform X1

      See identical proteins and their annotated locations for XP_005581694.1

      UniProtKB/TrEMBL
      A0A2K5V8W6, A0A7N9CI49
      Related
      ENSMFAP00000021158.1
      Conserved Domains (1) summary
      pfam04387
      Location:65 → 223
      PTPLA; Protein tyrosine phosphatase-like protein, PTPLA
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.