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    GABRB1 gamma-aminobutyric acid type A receptor subunit beta1 [ Ovis aries (sheep) ]

    Gene ID: 101122358, updated on 8-Mar-2024

    Summary

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    Gene symbol
    GABRB1
    Gene description
    gamma-aminobutyric acid type A receptor subunit beta1
    See related
    EnsemblRapid:ENSOARG00020007788
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ovis aries
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
    Orthologs
    human mouse all
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    Genomic context

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    See GABRB1 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 6 NC_056059.1 (66336300..66783598)

    Chromosome 6 - NC_056059.1Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase subunit 7B2, mitochondrial Neighboring gene gamma-aminobutyric acid type A receptor subunit alpha4 Neighboring gene uncharacterized LOC132659947 Neighboring gene transfer RNA cysteine (anticodon ACA) Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC132659948 Neighboring gene COMM domain containing 8

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_056059.1 Chromosome 6 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GABA-A receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables extracellular ligand-gated monoatomic ion channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables neurotransmitter receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chemical synaptic transmission IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in monoatomic ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nervous system process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of membrane potential IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of GABA-A receptor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    gamma-aminobutyric acid receptor subunit beta-1
    Names
    gamma-aminobutyric acid type A receptor beta1 subunit

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Genomic

    1. NC_056059.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

      Range
      66336300..66783598
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004009810.6 → XP_004009859.1  gamma-aminobutyric acid receptor subunit beta-1

      See identical proteins and their annotated locations for XP_004009859.1

      UniProtKB/TrEMBL
      A0A836AAP7
      Related
      ENSOARP00020010044.2, ENSOART00020012188.2
      Conserved Domains (1) summary
      TIGR00860
      Location:9 → 472
      LIC; Cation transporter family protein
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases
    Research Materials