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    HCRT hypocretin neuropeptide precursor [ Ovis aries (sheep) ]

    Gene ID: 101122291, updated on 8-Mar-2024

    Summary

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    Gene symbol
    HCRT
    Gene description
    hypocretin neuropeptide precursor
    See related
    EnsemblRapid:ENSOARG00020003058
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Ovis aries
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
    Orthologs
    human mouse all
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    Genomic context

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    See HCRT in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 11 NC_056064.1 (42033414..42034819, complement)

    Chromosome 11 - NC_056064.1Genomic Context describing neighboring genes Neighboring gene RAB5C, member RAS oncogene family Neighboring gene potassium voltage-gated channel subfamily H member 4 Neighboring gene GH3 domain containing Neighboring gene signal transducer and activator of transcription 5B Neighboring gene signal transducer and activator of transcription 5A

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_056064.1 Chromosome 11 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Immunohistochemical expression and distribution of orexin, orphanin and leptin in the major salivary glands of some mammals. Leone A, et al. Folia Histochem Cytobiol, 2012. PMID 23264212
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in feeding behavior IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuropeptide signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hypocretin neuropeptide precursor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Genomic

    1. NC_056064.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

      Range
      42033414..42034819 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015098429.4 → XP_014953915.2  hypocretin neuropeptide precursor

      UniProtKB/TrEMBL
      A0A6P3YKY5
      Related
      ENSOARP00020003858.1, ENSOART00020004694.2
      Conserved Domains (1) summary
      pfam02072
      Location:1 → 130
      Orexin; Prepro-orexin
    Nucleotide Protein Strain
    Heading Accession and Version

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