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    NAV2-AS5 NAV2 antisense RNA 5 [ Homo sapiens (human) ]

    Gene ID: 100874012, updated on 17-Sep-2024

    Summary

    Official Symbol
    NAV2-AS5provided by HGNC
    Official Full Name
    NAV2 antisense RNA 5provided by HGNC
    Primary source
    HGNC:HGNC:40740
    See related
    Ensembl:ENSG00000255043 AllianceGenome:HGNC:40740
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See NAV2-AS5 in Genome Data Viewer
    Location:
    11p15.1
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (19502672..19507229, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (19622707..19627264, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (19524219..19528776, complement)

    Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene CSRP3 and E2F8 antisense RNA 1 Neighboring gene Sharpr-MPRA regulatory region 11719 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4516 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4517 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4518 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3199 Neighboring gene proliferating cell nuclear antigen pseudogene 4 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr11:19416525-19417056 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4519 Neighboring gene MPRA-validated peak1231 silencer Neighboring gene RNA, 5S ribosomal pseudogene 335 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr11:19463438-19464637 Neighboring gene neuron navigator 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4521 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4522 Neighboring gene NAV2 antisense RNA 4 Neighboring gene microRNA 4486

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_049725.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC023950, BC040220
      Related
      ENST00000528726.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

      Range
      19502672..19507229 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060935.1 Alternate T2T-CHM13v2.0

      Range
      19622707..19627264 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)