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    DCN decorin [ Capra hircus (goat) ]

    Gene ID: 100860944, updated on 8-Mar-2024

    Summary

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    Gene symbol
    DCN
    Gene description
    decorin
    See related
    EnsemblRapid:ENSCHIG00000018030
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Capra hircus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Capra
    Orthologs
    human mouse all
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    Genomic context

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    See DCN in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    102 current ASM170441v1 (GCF_001704415.1) 5 NC_030812.1 (20825973..20862672, complement)
    101 previous assembly CHIR_1.0 (GCF_000317765.1) 5 NC_022297.1 (20367228..20404241, complement)

    Chromosome 5 - NC_030812.1Genomic Context describing neighboring genes Neighboring gene keratocan Neighboring gene lumican Neighboring gene uncharacterized LOC108636127 Neighboring gene transfer RNA cysteine (anticodon ACA)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    decorin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001285555.1 → NP_001272484.1  decorin precursor

      See identical proteins and their annotated locations for NP_001272484.1

      Status: PROVISIONAL

      Source sequence(s)
      HQ326237
      UniProtKB/TrEMBL
      A0A452F325, F2X2Y7
      Related
      ENSCHIP00000018742.2, ENSCHIT00000026557.2
      Conserved Domains (4) summary
      smart00013
      Location:55 → 84
      LRRNT; Leucine rich repeat N-terminal domain
      cd00116
      Location:62 → 282
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:63 → 85
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:87 → 142
      LRR_8; Leucine rich repeat

    RefSeqs of Annotated Genomes: Capra hircus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM170441v1 Primary Assembly

    Genomic

    1. NC_030812.1 Reference ASM170441v1 Primary Assembly

      Range
      20825973..20862672 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005679813.3 → XP_005679870.1  decorin isoform X1

      UniProtKB/TrEMBL
      A0A452F311, A0A452F325
      Conserved Domains (4) summary
      smart00013
      Location:55 → 84
      LRRNT; Leucine rich repeat N-terminal domain
      cd00116
      Location:60 → 282
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:63 → 85
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:87 → 142
      LRR_8; Leucine rich repeat
    Nucleotide Protein
    Heading Accession and Version

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