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    GMPPB GDP-mannose pyrophosphorylase B [ Canis lupus familiaris (dog) ]

    Gene ID: 100856660, updated on 17-Aug-2024

    Summary

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    Official Symbol
    GMPPBprovided by VGNC
    Official Full Name
    GDP-mannose pyrophosphorylase Bprovided by VGNC
    Primary source
    VGNC:VGNC:41293
    See related
    Ensembl:ENSCAFG00845025132
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See GMPPB in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 20 NC_051824.1 (39908319..39910564)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 20 NC_006602.4 (39471723..39473969)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 20 NC_049241.1 (39958590..39960836)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 20 NC_049280.1 (39275391..39277636)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 20 NC_049761.1 (39678760..39681006)

    Chromosome 20 - NC_051824.1Genomic Context describing neighboring genes Neighboring gene inka box actin regulator 1 Neighboring gene cadherin related family member 4 Neighboring gene inositol hexakisphosphate kinase 1 Neighboring gene aminoacyl tRNA synthase complex-interacting multifunctional protein 2-like Neighboring gene ring finger protein 123 Neighboring gene adhesion molecule with Ig like domain 3 Neighboring gene macrophage stimulating 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables mannose-1-phosphate guanylyltransferase (GTP) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in GDP-mannose biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell wall mannoprotein biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mannose-1-phosphate guanyltransferase beta
    XP_003639816.1
    XP_038283677.1
    XP_038359361.1
    XP_038422364.1
    XP_038486512.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051824.1 Reference ROS_Cfam_1.0

      Range
      39908319..39910564
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038427749.1 → XP_038283677.1  mannose-1-phosphate guanyltransferase beta

      UniProtKB/TrEMBL
      A0A8C0R5B1, A0A8C0SY08, A0A8I3PK79
      Related
      ENSCAFP00845034756.1, ENSCAFT00845044355.1
      Conserved Domains (2) summary
      cd06425
      Location:1 → 233
      M1P_guanylylT_B_like_N; N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins
      cl00160
      Location:255 → 334
      LbetaH; Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes ...

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049280.1 Alternate UMICH_Zoey_3.1

      Range
      39275391..39277636
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038503433.1 → XP_038359361.1  mannose-1-phosphate guanyltransferase beta

      Conserved Domains (2) summary
      cd06425
      Location:1 → 233
      M1P_guanylylT_B_like_N; N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins
      cl00160
      Location:255 → 334
      LbetaH; Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes ...

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049761.1 Alternate UNSW_CanFamBas_1.0

      Range
      39678760..39681006
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038630584.1 → XP_038486512.1  mannose-1-phosphate guanyltransferase beta

      Conserved Domains (2) summary
      cd06425
      Location:1 → 233
      M1P_guanylylT_B_like_N; N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins
      cl00160
      Location:255 → 334
      LbetaH; Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes ...

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049241.1 Alternate UU_Cfam_GSD_1.0

      Range
      39958590..39960836
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038566436.1 → XP_038422364.1  mannose-1-phosphate guanyltransferase beta

      UniProtKB/TrEMBL
      A0A8C0R5B1, A0A8C0SY08, A0A8I3PK79
      Conserved Domains (2) summary
      cd06425
      Location:1 → 233
      M1P_guanylylT_B_like_N; N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins
      cl00160
      Location:255 → 334
      LbetaH; Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes ...

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006602.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      39471723..39473969
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003639768.4 → XP_003639816.1  mannose-1-phosphate guanyltransferase beta

      UniProtKB/TrEMBL
      A0A8C0R5B1, A0A8C0SY08, A0A8I3PK79
      Conserved Domains (2) summary
      cd06425
      Location:1 → 233
      M1P_guanylylT_B_like_N; N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins
      cl00160
      Location:255 → 334
      LbetaH; Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes ...
    Nucleotide Protein
    Heading Accession and Version

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