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    MRPS34 mitochondrial ribosomal protein S34 [ Canis lupus familiaris (dog) ]

    Gene ID: 100856578, updated on 17-Aug-2024

    Summary

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    Official Symbol
    MRPS34provided by VGNC
    Official Full Name
    mitochondrial ribosomal protein S34provided by VGNC
    Primary source
    VGNC:VGNC:43422
    See related
    Ensembl:ENSCAFG00845019497
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See MRPS34 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 6 NC_051810.1 (39446788..39447801)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 6 NC_006588.4 (40369262..40370275)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 6 NC_049227.1 (39574522..39575532)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 6 NC_049266.1 (39123490..39124503)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 6 NC_049747.1 (39096071..39097084)

    Chromosome 6 - NC_051810.1Genomic Context describing neighboring genes Neighboring gene NUBP iron-sulfur cluster assembly factor 2, cytosolic Neighboring gene splA/ryanodine receptor domain and SOCS box containing 3 Neighboring gene essential meiotic structure-specific endonuclease subunit 2 Neighboring gene mitogen-activated protein kinase 8 interacting protein 3 Neighboring gene NME/NM23 nucleoside diphosphate kinase 3 Neighboring gene Jupiter microtubule associated homolog 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitochondrial translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of mitochondrial small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    28S ribosomal protein S34, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051810.1 Reference ROS_Cfam_1.0

      Range
      39446788..39447801
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038667720.1 → XP_038523648.1  28S ribosomal protein S34, mitochondrial

      UniProtKB/TrEMBL
      A0A8C0JGX2, A0A8C0PQN9, A0A8I3NZE6, A0A8P0NKK4
      Related
      ENSCAFP00845027128.1, ENSCAFT00845034635.1
      Conserved Domains (1) summary
      pfam16053
      Location:74 → 186
      MRP-S34; Mitochondrial 28S ribosomal protein S34

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049266.1 Alternate UMICH_Zoey_3.1

      Range
      39123490..39124503
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038479552.1 → XP_038335480.1  28S ribosomal protein S34, mitochondrial

      Conserved Domains (1) summary
      pfam16053
      Location:74 → 186
      MRP-S34; Mitochondrial 28S ribosomal protein S34

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049747.1 Alternate UNSW_CanFamBas_1.0

      Range
      39096071..39097084
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038604935.1 → XP_038460863.1  28S ribosomal protein S34, mitochondrial

      Conserved Domains (1) summary
      pfam16053
      Location:74 → 186
      MRP-S34; Mitochondrial 28S ribosomal protein S34

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049227.1 Alternate UU_Cfam_GSD_1.0

      Range
      39574522..39575532
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038540819.1 → XP_038396747.1  28S ribosomal protein S34, mitochondrial

      UniProtKB/TrEMBL
      A0A8C0JGX2, A0A8C0PQN9, A0A8I3NZE6, A0A8P0NKK4
      Conserved Domains (1) summary
      pfam16053
      Location:74 → 186
      MRP-S34; Mitochondrial 28S ribosomal protein S34

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006588.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      40369262..40370275
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003639112.5 → XP_003639160.1  28S ribosomal protein S34, mitochondrial

      UniProtKB/TrEMBL
      A0A8C0JGX2, A0A8C0PQN9, A0A8I3NZE6, A0A8P0NKK4
      Conserved Domains (1) summary
      pfam16053
      Location:74 → 186
      MRP-S34; Mitochondrial 28S ribosomal protein S34
    Nucleotide Protein
    Heading Accession and Version

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