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    Nr1d1 nuclear receptor subfamily 1 group D member 1 [ Cricetulus griseus (Chinese hamster) ]

    Gene ID: 100771327, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Nr1d1
    Gene description
    nuclear receptor subfamily 1 group D member 1
    Locus tag
    I79_018778
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cricetulus griseus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
    Orthologs
    human mouse all
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    Genomic context

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    See Nr1d1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614892.1 (28455..35090, complement)
    104 current CriGri-PICRH-1.0 (GCF_003668045.3) 7 NC_048600.1 (111853598..111857138, complement)

    NW_003614892.1Genomic Context describing neighboring genes Neighboring gene thyroid hormone receptor alpha Neighboring gene MSL complex subunit 1 Neighboring gene CASC3 exon junction complex subunit

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in hormone-mediated signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nuclear receptor subfamily 1 group D member 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CriGri_1.0 Primary Assembly

    Genomic

    1. NW_003614892.1 Reference CriGri_1.0 Primary Assembly

      Range
      28455..35090 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035461216.1 → XP_035317107.1  nuclear receptor subfamily 1 group D member 1 isoform X1

      UniProtKB/TrEMBL
      A0A8C2LS28
      Conserved Domains (2) summary
      cd07166
      Location:125 → 213
      NR_DBD_REV_ERB; DNA-binding domain of REV-ERB receptor-like is composed of two C4-type zinc fingers
      cl11397
      Location:416 → 552
      NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators

    Alternate CriGri-PICRH-1.0

    Genomic

    1. NC_048600.1 Alternate CriGri-PICRH-1.0

      Range
      111853598..111857138 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035448152.1 → XP_035304043.1  nuclear receptor subfamily 1 group D member 1 isoform X2

      UniProtKB/TrEMBL
      A0A8C2LS28, A0A9J7K0U0
      Conserved Domains (2) summary
      cd07166
      Location:138 → 226
      NR_DBD_REV_ERB; DNA-binding domain of REV-ERB receptor-like is composed of two C4-type zinc fingers
      cl11397
      Location:429 → 565
      NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators
    Nucleotide Protein Strain
    Heading Accession and Version

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