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    Pygb glycogen phosphorylase B [ Cricetulus griseus (Chinese hamster) ]

    Gene ID: 100769186, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Pygb
    Gene description
    glycogen phosphorylase B
    Locus tag
    I79_006118
    See related
    Ensembl:ENSCGRG00015004961
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cricetulus griseus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
    Orthologs
    human mouse all
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    Genomic context

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    See Pygb in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613762.1 (845435..876303, complement)
    104 current CriGri-PICRH-1.0 (GCF_003668045.3) 6 NC_048599.1 (28869655..28918610, complement)

    NW_003613762.1Genomic Context describing neighboring genes Neighboring gene histone deacetylase 1-like Neighboring gene GINS complex subunit 1 Neighboring gene abhydrolase domain containing 12, lysophospholipase Neighboring gene 40S ribosomal protein S2-like Neighboring gene ectonucleoside triphosphate diphosphohydrolase 6 Neighboring gene visual system homeobox 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables glycogen phosphorylase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables pyridoxal phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in glycogen catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glycogen phosphorylase, brain form
    Names
    Glycogen phosphorylase, brain form
    brain glycogen phosphorylase
    phosphorylase, glycogen; brain

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CriGri_1.0 Primary Assembly

    Genomic

    1. NW_003613762.1 Reference CriGri_1.0 Primary Assembly

      Range
      845435..876303 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016974436.3 → XP_016829925.1  glycogen phosphorylase, brain form isoform X1

      UniProtKB/TrEMBL
      G3H6Z4
      Conserved Domains (2) summary
      cd04300
      Location:1 → 737
      GT1_Glycogen_Phosphorylase; This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of ...
      TIGR02093
      Location:1 → 737
      P_ylase; glycogen/starch/alpha-glucan phosphorylases

    Alternate CriGri-PICRH-1.0

    Genomic

    1. NC_048599.1 Alternate CriGri-PICRH-1.0

      Range
      28869655..28918610 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027421556.1 → XP_027277357.1  glycogen phosphorylase, brain form isoform X2

      UniProtKB/TrEMBL
      A0A3L7HE11
      Related
      ENSCGRP00015006442.1, ENSCGRT00015007926.2
    Nucleotide Protein Strain
    Heading Accession and Version

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