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    Prmt5 protein arginine methyltransferase 5 [ Cricetulus griseus (Chinese hamster) ]

    Gene ID: 100768836, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Prmt5
    Gene description
    protein arginine methyltransferase 5
    Locus tag
    I79_013398
    See related
    Ensembl:ENSCGRG00015020168
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cricetulus griseus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
    Orthologs
    human mouse all
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    Genomic context

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    See Prmt5 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614213.1 (597047..607429, complement)
    104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276807.1 (209726498..209736880, complement)

    NW_003614213.1Genomic Context describing neighboring genes Neighboring gene LDL receptor related protein 10 Neighboring gene RRAD and GEM like GTPase 2 Neighboring gene uncharacterized LOC118239623 Neighboring gene transfer RNA arginine (anticodon ACG) Neighboring gene 40S ribosomal protein S8-like Neighboring gene HAUS augmin like complex subunit 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone arginine N-methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in peptidyl-arginine N-methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein arginine N-methyltransferase 5
    Names
    Protein arginine N-methyltransferase 5
    protein arginine N-methyltransferase 5-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CriGri_1.0 Primary Assembly

    Genomic

    1. NW_003614213.1 Reference CriGri_1.0 Primary Assembly

      Range
      597047..607429 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003506122.5 → XP_003506170.1  protein arginine N-methyltransferase 5

      UniProtKB/TrEMBL
      G3HRD3
      Conserved Domains (2) summary
      pfam05185
      Location:183 → 619
      PRMT5; PRMT5 arginine-N-methyltransferase
      pfam16950
      Location:184 → 465
      SAMBD; SAM-binding_domain

    Alternate CriGri-PICRH-1.0

    Genomic

    1. NW_023276807.1 Alternate CriGri-PICRH-1.0

      Range
      209726498..209736880 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027390643.2 → XP_027246444.1  protein arginine N-methyltransferase 5

      UniProtKB/TrEMBL
      A0A8C2M5Z9, G3HRD3
      Related
      ENSCGRP00015048931.1, ENSCGRT00015068443.1
    Nucleotide Protein Strain
    Heading Accession and Version

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