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    Ints6l integrator complex subunit 6 like [ Cricetulus griseus (Chinese hamster) ]

    Gene ID: 100768803, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Ints6l
    Gene description
    integrator complex subunit 6 like
    Locus tag
    I79_005977
    See related
    Ensembl:ENSCGRG00015009313
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cricetulus griseus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
    Also known as
    Sage1; Ddx26b
    Annotation information
    Annotation category: partial on reference assembly
    Orthologs
    human mouse all
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    Genomic context

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    See Ints6l in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613755.1 (1864853..1914420, complement)
    104 current CriGri-PICRH-1.0 (GCF_003668045.3) X NC_048604.1 (15956706..16018504, complement)

    NW_003613755.1Genomic Context describing neighboring genes Neighboring gene integrator complex subunit 6-like Neighboring gene integrator complex subunit 6-like Neighboring gene zinc finger protein 449 Neighboring gene zinc finger protein 449-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in snRNA 3'-end processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of integrator complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    integrator complex subunit 6-like
    Names
    DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B
    Protein DDX26B
    sarcoma antigen 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CriGri_1.0 Primary Assembly

    Genomic

    1. NW_003613755.1 Reference CriGri_1.0 Primary Assembly

      Range
      1864853..1914420 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035454146.1 → XP_035310037.1  integrator complex subunit 6-like isoform X1

      UniProtKB/TrEMBL
      A0A061HUR5
      Conserved Domains (1) summary
      pfam15300
      Location:757 → 818
      INT_SG_DDX_CT_C; INTS6/SAGE1/DDX26B/CT45 C-terminus

    Alternate CriGri-PICRH-1.0

    Genomic

    1. NC_048604.1 Alternate CriGri-PICRH-1.0

      Range
      15956706..16018504 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027433350.2 → XP_027289151.1  integrator complex subunit 6-like isoform X3

      UniProtKB/TrEMBL
      A0A061HUR5, A0A9J7K336
      Related
      ENSCGRP00015012425.2, ENSCGRT00015015222.2

    2. XM_027433348.2 → XP_027289149.1  integrator complex subunit 6-like isoform X5

      UniProtKB/TrEMBL
      A0A061HUR5, A0A9J7GJZ9

    3. XM_027433345.2 → XP_027289146.1  integrator complex subunit 6-like isoform X2

      UniProtKB/TrEMBL
      A0A061HUR5, A0A8C2LNL3

    4. XM_027433349.2 → XP_027289150.1  integrator complex subunit 6-like isoform X6

      UniProtKB/TrEMBL
      A0A061HUR5, A0A9J7GQ11

    5. XM_027433347.2 → XP_027289148.1  integrator complex subunit 6-like isoform X4

      UniProtKB/TrEMBL
      A0A061HUR5, A0A8C2LRE2
      Related
      ENSCGRP00015012361.2, ENSCGRT00015015146.2

    RNA

    1. XR_003488487.2 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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