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    Chga chromogranin A [ Cricetulus griseus (Chinese hamster) ]

    Gene ID: 100766424, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Chga
    Gene description
    chromogranin A
    See related
    Ensembl:ENSCGRG00015021346
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cricetulus griseus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
    Orthologs
    human mouse all
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    Genomic context

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    See Chga in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614307.1 (860394..871512, complement)
    104 current CriGri-PICRH-1.0 (GCF_003668045.3) 5 NC_048598.1 (103507756..103518835, complement)

    NW_003614307.1Genomic Context describing neighboring genes Neighboring gene modulator of apoptosis 1 Neighboring gene inositol-tetrakisphosphate 1-kinase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in adenylate cyclase-activating adrenergic receptor signaling pathway involved in cardiac muscle relaxation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in defense response to bacterium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of catecholamine secretion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of insulin secretion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chromaffin granule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    chromogranin-A
    Names
    Chromogranin-A
    chromogranin A (parathyroid secretory protein 1)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CriGri_1.0 Primary Assembly

    Genomic

    1. NW_003614307.1 Reference CriGri_1.0 Primary Assembly

      Range
      860394..871512 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035458764.1 → XP_035314655.1  chromogranin-A isoform X2

      UniProtKB/TrEMBL
      A0A9J7K5P5
      Conserved Domains (1) summary
      pfam01271
      Location:121 → 304
      Granin; Granin (chromogranin or secretogranin)

    2. XM_003506936.3 → XP_003506984.1  chromogranin-A isoform X1

      See identical proteins and their annotated locations for XP_003506984.1

      UniProtKB/TrEMBL
      G3HU91
      Conserved Domains (1) summary
      pfam01271
      Location:25 → 434
      Granin; Granin (chromogranin or secretogranin)

    Alternate CriGri-PICRH-1.0

    Genomic

    1. NC_048598.1 Alternate CriGri-PICRH-1.0

      Range
      103507756..103518835 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035444827.1 → XP_035300718.1  chromogranin-A isoform X2

      UniProtKB/TrEMBL
      A0A9J7K5P5
      Conserved Domains (1) summary
      pfam01271
      Location:121 → 304
      Granin; Granin (chromogranin or secretogranin)

    2. XM_027419163.2 → XP_027274964.1  chromogranin-A isoform X1

      UniProtKB/TrEMBL
      G3HU91
      Related
      ENSCGRP00015028193.1, ENSCGRT00015034517.2
    Nucleotide Protein Strain
    Heading Accession and Version

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