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    Fkbp1a FKBP prolyl isomerase 1A [ Cricetulus griseus (Chinese hamster) ]

    Gene ID: 100763474, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Fkbp1a
    Gene description
    FKBP prolyl isomerase 1A
    See related
    Ensembl:ENSCGRG00015004461
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cricetulus griseus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
    Orthologs
    human mouse all
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    Genomic context

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    See Fkbp1a in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613762.1 (460876..470052, complement)
    104 current CriGri-PICRH-1.0 (GCF_003668045.3) 6 NC_048599.1 (28484532..28509000, complement)

    NW_003613762.1Genomic Context describing neighboring genes Neighboring gene acidic leucine-rich nuclear phosphoprotein 32 family member E-like Neighboring gene syntaphilin Neighboring gene syndecan binding protein 2 Neighboring gene NSFL1 cofactor Neighboring gene sperm motility kinase X-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables peptidyl-prolyl cis-trans isomerase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    peptidyl-prolyl cis-trans isomerase FKBP1A
    Names
    FK506 binding protein 1A, 12kDa
    Peptidyl-prolyl cis-trans isomerase FKBP1A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CriGri_1.0 Primary Assembly

    Genomic

    1. NW_003613762.1 Reference CriGri_1.0 Primary Assembly

      Range
      460876..470052 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027434929.2 → XP_027290730.1  peptidyl-prolyl cis-trans isomerase FKBP1A isoform X1

      UniProtKB/TrEMBL
      G3H6Y5
      Conserved Domains (1) summary
      pfam00254
      Location:1 → 76
      FKBP_C; FKBP-type peptidyl-prolyl cis-trans isomerase

    2. XM_003499952.4 → XP_003500000.1  peptidyl-prolyl cis-trans isomerase FKBP1A isoform X1

      See identical proteins and their annotated locations for XP_003500000.1

      UniProtKB/TrEMBL
      G3H6Y5
      Conserved Domains (1) summary
      pfam00254
      Location:1 → 76
      FKBP_C; FKBP-type peptidyl-prolyl cis-trans isomerase

    Alternate CriGri-PICRH-1.0

    Genomic

    1. NC_048599.1 Alternate CriGri-PICRH-1.0

      Range
      28484532..28509000 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027421547.2 → XP_027277348.1  peptidyl-prolyl cis-trans isomerase FKBP1A isoform X2

      UniProtKB/TrEMBL
      A0A3L7HEZ0
      Related
      ENSCGRP00015005705.1, ENSCGRT00015007034.2
      Conserved Domains (1) summary
      COG0545
      Location:2 → 106
      FkpA; FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]

    2. XM_027421548.2 → XP_027277349.1  peptidyl-prolyl cis-trans isomerase FKBP1A isoform X2

      UniProtKB/TrEMBL
      A0A3L7HEZ0
      Conserved Domains (1) summary
      COG0545
      Location:2 → 106
      FkpA; FKBP-type peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
    Nucleotide Protein Strain
    Heading Accession and Version

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