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    Exo5 exonuclease 5 [ Cricetulus griseus (Chinese hamster) ]

    Gene ID: 100753327, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Exo5
    Gene description
    exonuclease 5
    See related
    Ensembl:ENSCGRG00015040553
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cricetulus griseus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
    Orthologs
    human mouse all
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    Genomic context

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    See Exo5 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613862.1 (288137..291830)
    104 current CriGri-PICRH-1.0 (GCF_003668045.3) 2 NC_048595.1 (31231743..31235436)

    NW_003613862.1Genomic Context describing neighboring genes Neighboring gene small ArfGAP2 Neighboring gene zinc finger protein 69 homolog Neighboring gene U6 spliceosomal RNA Neighboring gene regulating synaptic membrane exocytosis 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables single-stranded DNA 5'-3' DNA exonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in interstrand cross-link repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    exonuclease V
    Names
    Defects in morphology protein 1-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CriGri_1.0 Primary Assembly

    Genomic

    1. NW_003613862.1 Reference CriGri_1.0 Primary Assembly

      Range
      288137..291830
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003501818.5 → XP_003501866.1  exonuclease V

      See identical proteins and their annotated locations for XP_003501866.1

      UniProtKB/TrEMBL
      G3HCM8
      Conserved Domains (1) summary
      pfam09810
      Location:72 → 355
      Exo5; Exonuclease V - a 5' deoxyribonuclease

    Alternate CriGri-PICRH-1.0

    Genomic

    1. NC_048595.1 Alternate CriGri-PICRH-1.0

      Range
      31231743..31235436
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027399151.2 → XP_027254952.1  exonuclease V

      UniProtKB/TrEMBL
      G3HCM8
      Related
      ENSCGRP00015049251.1, ENSCGRT00015069686.1
    Nucleotide Protein Strain
    Heading Accession and Version

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