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    NEU2 neuraminidase 2 [ Sus scrofa (pig) ]

    Gene ID: 100738467, updated on 17-Aug-2024

    Summary

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    Official Symbol
    NEU2provided by VGNC
    Official Full Name
    neuraminidase 2provided by VGNC
    Primary source
    VGNC:VGNC:96438
    See related
    Ensembl:ENSSSCG00000016297
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Expression
    Low expression observed in reference dataset See more
    Orthologs
    human mouse all
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    Genomic context

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    See NEU2 in Genome Data Viewer
    Location:
    chromosome: 15
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 15 NC_010457.5 (133392559..133479406)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 15 NC_010457.4 (147509793..147545593, complement)

    Chromosome 15 - NC_010457.5Genomic Context describing neighboring genes Neighboring gene GRB10 interacting GYF protein 2 Neighboring gene potassium inwardly rectifying channel subfamily J member 13 Neighboring gene secondary ossification center associated regulator of chondrocyte maturation Neighboring gene neuronal guanine nucleotide exchange factor Neighboring gene 60S ribosomal protein L7 pseudogene Neighboring gene uncharacterized LOC106506412 Neighboring gene inositol polyphosphate-5-phosphatase D

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables exo-alpha-sialidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ganglioside catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in oligosaccharide catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in lysosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sialidase-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010457.5 Reference Sscrofa11.1 Primary Assembly

      Range
      133392559..133479406
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021074906.1 → XP_020930565.1  sialidase-2

      UniProtKB/TrEMBL
      A0A8D1WWZ7, F1SM45
      Conserved Domains (1) summary
      cd15482
      Location:10 → 367
      Sialidase_non-viral; Non-viral sialidases

    2. XM_021074907.1 → XP_020930566.1  sialidase-2

      UniProtKB/TrEMBL
      A0A8D1WWZ7, F1SM45
      Conserved Domains (1) summary
      cd15482
      Location:10 → 367
      Sialidase_non-viral; Non-viral sialidases

    3. XM_013984592.2 → XP_013840046.1  sialidase-2

      UniProtKB/TrEMBL
      A0A8D1WWZ7, F1SM45
      Related
      ENSSSCP00000017266.1, ENSSSCT00000017747.3
      Conserved Domains (1) summary
      cd15482
      Location:10 → 367
      Sialidase_non-viral; Non-viral sialidases
    Nucleotide Protein
    Heading Accession and Version

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