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    Tmem86a transmembrane protein 86A [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100735970, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Tmem86a
    Gene description
    transmembrane protein 86A
    See related
    Ensembl:ENSCPOG00000035510
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    See Tmem86a in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947492.1 (92330832..92339563, complement)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176192.1 (317153..321704, complement)

    NW_026947492.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134477741 Neighboring gene protein tyrosine phosphatase non-receptor type 5 Neighboring gene uncharacterized LOC134477742 Neighboring gene SPT2 chromatin protein domain containing 1 Neighboring gene mitochondrial sheath formation associated

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lysoplasmalogenase TMEM86A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947492.1 Reference mCavPor4.1

      Range
      92330832..92339563 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003461214.5 → XP_003461262.1  lysoplasmalogenase TMEM86A

      UniProtKB/TrEMBL
      A0A286XBZ3
      Related
      ENSCPOP00000022919.1
      Conserved Domains (1) summary
      pfam07947
      Location:37 → 224
      YhhN; YhhN-like protein
    Nucleotide Protein
    Heading Accession and Version

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