U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    Fkbp8 FKBP prolyl isomerase 8 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100735438, updated on 8-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    Fkbp8
    Gene description
    FKBP prolyl isomerase 8
    See related
    Ensembl:ENSCPOG00000026709
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Fkbp8 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947500.1 (45234166..45241229, complement)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176347.1 (8109071..8116113, complement)

    NW_026947500.1Genomic Context describing neighboring genes Neighboring gene inositol-3-phosphate synthase 1 Neighboring gene elongation factor for RNA polymerase II Neighboring gene uncharacterized LOC134470959 Neighboring gene small nucleolar RNA U13 Neighboring gene KxDL motif containing 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables peptidyl-prolyl cis-trans isomerase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein folding chaperone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of apoptotic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein folding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endomembrane system IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrial envelope IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    peptidyl-prolyl cis-trans isomerase FKBP8
    Names
    FK506 binding protein 8

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947500.1 Reference mCavPor4.1

      Range
      45234166..45241229 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005001609.4 → XP_005001666.2  peptidyl-prolyl cis-trans isomerase FKBP8 isoform X2

      UniProtKB/TrEMBL
      H0W8E5
      Related
      ENSCPOP00000019251.2
      Conserved Domains (3) summary
      COG0457
      Location:214 → 337
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:229 → 265
      TPR; TPR repeat [structural motif]
      pfam00254
      Location:112 → 200
      FKBP_C; FKBP-type peptidyl-prolyl cis-trans isomerase

    2. XM_013147516.3 → XP_013002970.1  peptidyl-prolyl cis-trans isomerase FKBP8 isoform X1

      See identical proteins and their annotated locations for XP_013002970.1

      Conserved Domains (4) summary
      smart00028
      Location:306 → 339
      TPR; Tetratricopeptide repeats
      sd00006
      Location:230 → 266
      TPR; TPR repeat [structural motif]
      pfam00254
      Location:112 → 201
      FKBP_C; FKBP-type peptidyl-prolyl cis-trans isomerase
      pfam13414
      Location:273 → 337
      TPR_11; TPR repeat

    3. XM_013147518.3 → XP_013002972.1  peptidyl-prolyl cis-trans isomerase FKBP8 isoform X1

      See identical proteins and their annotated locations for XP_013002972.1

      Conserved Domains (4) summary
      smart00028
      Location:306 → 339
      TPR; Tetratricopeptide repeats
      sd00006
      Location:230 → 266
      TPR; TPR repeat [structural motif]
      pfam00254
      Location:112 → 201
      FKBP_C; FKBP-type peptidyl-prolyl cis-trans isomerase
      pfam13414
      Location:273 → 337
      TPR_11; TPR repeat

    4. XM_013147517.2 → XP_013002971.1  peptidyl-prolyl cis-trans isomerase FKBP8 isoform X1

      See identical proteins and their annotated locations for XP_013002971.1

      Conserved Domains (4) summary
      smart00028
      Location:306 → 339
      TPR; Tetratricopeptide repeats
      sd00006
      Location:230 → 266
      TPR; TPR repeat [structural motif]
      pfam00254
      Location:112 → 201
      FKBP_C; FKBP-type peptidyl-prolyl cis-trans isomerase
      pfam13414
      Location:273 → 337
      TPR_11; TPR repeat

    5. XM_063228009.1 → XP_063084079.1  peptidyl-prolyl cis-trans isomerase FKBP8 isoform X3

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials