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    Kcnt1 potassium sodium-activated channel subfamily T member 1 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100734549, updated on 10-Oct-2024

    Summary

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    Gene symbol
    Kcnt1
    Gene description
    potassium sodium-activated channel subfamily T member 1
    See related
    Ensembl:ENSCPOG00000019885
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    See Kcnt1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    35
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947532.1 (583086..629573)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176401.1 (38598763..38642026)

    NW_026947532.1Genomic Context describing neighboring genes Neighboring gene lipocalin 9 Neighboring gene spermatogenesis and oogenesis specific basic helix-loop-helix 1 Neighboring gene calmodulin regulated spectrin associated protein 1 Neighboring gene UBA domain containing 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables intracellular sodium-activated potassium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables outward rectifier potassium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in potassium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    potassium channel subfamily T member 1
    Names
    potassium channel, subfamily T, member 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947532.1 Reference mCavPor4.1

      Range
      583086..629573
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063244057.1 → XP_063100127.1  potassium channel subfamily T member 1 isoform X6

    2. XM_003473114.5 → XP_003473162.1  potassium channel subfamily T member 1 isoform X13

      UniProtKB/TrEMBL
      A0A286XP05
      Related
      ENSCPOP00000027133.1
      Conserved Domains (2) summary
      pfam03493
      Location:496 → 591
      BK_channel_a; Calcium-activated BK potassium channel alpha subunit
      pfam07885
      Location:270 → 343
      Ion_trans_2; Ion channel

    3. XM_013155905.3 → XP_013011359.1  potassium channel subfamily T member 1 isoform X15

      UniProtKB/TrEMBL
      A0A286Y3B3
      Related
      ENSCPOP00000032047.1
      Conserved Domains (2) summary
      pfam03493
      Location:510 → 605
      BK_channel_a; Calcium-activated BK potassium channel alpha subunit
      pfam07885
      Location:284 → 357
      Ion_trans_2; Ion channel

    4. XM_013155902.3 → XP_013011356.1  potassium channel subfamily T member 1 isoform X12

      UniProtKB/TrEMBL
      A0A286Y4K3
      Related
      ENSCPOP00000032762.1
      Conserved Domains (2) summary
      pfam03493
      Location:496 → 591
      BK_channel_a; Calcium-activated BK potassium channel alpha subunit
      pfam07885
      Location:270 → 343
      Ion_trans_2; Ion channel

    5. XM_063244060.1 → XP_063100130.1  potassium channel subfamily T member 1 isoform X10

    6. XM_063244055.1 → XP_063100125.1  potassium channel subfamily T member 1 isoform X4

    7. XM_063244053.1 → XP_063100123.1  potassium channel subfamily T member 1 isoform X2

    8. XM_063244052.1 → XP_063100122.1  potassium channel subfamily T member 1 isoform X1

    9. XM_063244058.1 → XP_063100128.1  potassium channel subfamily T member 1 isoform X7

    10. XM_063244054.1 → XP_063100124.1  potassium channel subfamily T member 1 isoform X3

    11. XM_023566395.2 → XP_023422163.1  potassium channel subfamily T member 1 isoform X8

      UniProtKB/TrEMBL
      A0A286Y3B3, A0A286Y4K3
      Conserved Domains (3) summary
      pfam00520
      Location:140 → 320
      Ion_trans; Ion transport protein
      pfam03493
      Location:481 → 576
      BK_channel_a; Calcium-activated BK potassium channel alpha subunit
      pfam07885
      Location:255 → 328
      Ion_trans_2; Ion channel

    12. XM_063244056.1 → XP_063100126.1  potassium channel subfamily T member 1 isoform X5

    13. XM_003473111.5 → XP_003473159.1  potassium channel subfamily T member 1 isoform X9

      UniProtKB/TrEMBL
      A0A286Y4K3, H0W2H8
      Related
      ENSCPOP00000017171.2
      Conserved Domains (2) summary
      pfam03493
      Location:481 → 576
      BK_channel_a; Calcium-activated BK potassium channel alpha subunit
      pfam07885
      Location:255 → 328
      Ion_trans_2; Ion channel

    14. XM_005005095.4 → XP_005005152.1  potassium channel subfamily T member 1 isoform X11

      UniProtKB/TrEMBL
      A0A286XU23, A0A286Y4K3
      Related
      ENSCPOP00000028825.1
      Conserved Domains (2) summary
      pfam03493
      Location:467 → 562
      BK_channel_a; Calcium-activated BK potassium channel alpha subunit
      pfam07885
      Location:241 → 314
      Ion_trans_2; Ion channel

    15. XM_063244061.1 → XP_063100131.1  potassium channel subfamily T member 1 isoform X14

    RNA

    1. XR_010045923.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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