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    Rap1b RAP1B, member of RAS oncogene family [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100734094, updated on 3-Apr-2024

    Summary

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    Gene symbol
    Rap1b
    Gene description
    RAP1B, member of RAS oncogene family
    See related
    Ensembl:ENSCPOG00000032380
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    See Rap1b in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947491.1 (61252358..61293865)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176410.1 (29935451..29960183, complement)

    NW_026947491.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134477355 Neighboring gene cyclin-dependent kinase 4-like Neighboring gene uncharacterized LOC134477356 Neighboring gene nucleoporin 107

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GDP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Rap protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to cAMP IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of synaptic vesicle exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ras-related protein Rap-1b

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947491.1 Reference mCavPor4.1

      Range
      61252358..61293865
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063255103.1 → XP_063111173.1  ras-related protein Rap-1b

      UniProtKB/TrEMBL
      A0A286Y518

    2. XM_063255104.1 → XP_063111174.1  ras-related protein Rap-1b

      UniProtKB/TrEMBL
      A0A286Y518
    Nucleotide Protein
    Heading Accession and Version

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