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    Man1c1 mannosidase alpha class 1C member 1 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100733888, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Man1c1
    Gene description
    mannosidase alpha class 1C member 1
    See related
    Ensembl:ENSCPOG00000012627
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    See Man1c1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947508.1 (19308234..19438521)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176394.1 (10275430..10405885, complement)

    NW_026947508.1Genomic Context describing neighboring genes Neighboring gene U4 spliceosomal RNA Neighboring gene low density lipoprotein receptor adaptor protein 1 Neighboring gene uncharacterized LOC134472964 Neighboring gene selenoprotein N Neighboring gene mitochondrial fission regulator 1 like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mannose trimming involved in glycoprotein ERAD pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular exosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    mannosyl-oligosaccharide 1,2-alpha-mannosidase IC

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947508.1 Reference mCavPor4.1

      Range
      19308234..19438521
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063235792.1 → XP_063091862.1  mannosyl-oligosaccharide 1,2-alpha-mannosidase IC isoform X1

    2. XM_003471319.5 → XP_003471367.2  mannosyl-oligosaccharide 1,2-alpha-mannosidase IC isoform X2

    3. XM_063235793.1 → XP_063091863.1  mannosyl-oligosaccharide 1,2-alpha-mannosidase IC isoform X3

    Nucleotide Protein
    Heading Accession and Version

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    Research Materials