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    Adat2 adenosine deaminase tRNA specific 2 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100733583, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Adat2
    Gene description
    adenosine deaminase tRNA specific 2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    See Adat2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947505.1 (10265471..10311512, complement)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176351.1 (3809399..3830159)

    NW_026947505.1Genomic Context describing neighboring genes Neighboring gene HIVEP zinc finger 2 Neighboring gene U6atac minor spliceosomal RNA Neighboring gene androgen induced 1 Neighboring gene peroxisomal biogenesis factor 3 Neighboring gene alpha-L-fucosidase 2 Neighboring gene phosphatase and actin regulator 2 Neighboring gene 5S ribosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables tRNA-specific adenosine-34 deaminase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in tRNA wobble adenosine to inosine editing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tRNA-specific adenosine deaminase 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947505.1 Reference mCavPor4.1

      Range
      10265471..10311512 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063233408.1 → XP_063089478.1  tRNA-specific adenosine deaminase 2 isoform X1

    2. XM_063233410.1 → XP_063089480.1  tRNA-specific adenosine deaminase 2 isoform X3

    3. XM_063233409.1 → XP_063089479.1  tRNA-specific adenosine deaminase 2 isoform X2

    Nucleotide Protein
    Heading Accession and Version

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    Research Materials