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    Nab1 NGFI-A binding protein 1 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100733462, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Nab1
    Gene description
    NGFI-A binding protein 1
    See related
    Ensembl:ENSCPOG00000013077
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    See Nab1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947495.1 (75702903..75742833)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176416.1 (1862104..1895046, complement)

    NW_026947495.1Genomic Context describing neighboring genes Neighboring gene major facilitator superfamily domain containing 6 Neighboring gene uncharacterized LOC134478333 Neighboring gene nuclear envelope integral membrane protein 2 Neighboring gene uncharacterized LOC134478335 Neighboring gene uncharacterized LOC134478221 Neighboring gene uncharacterized LOC106025428

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription coregulator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription factor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    NGFI-A-binding protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947495.1 Reference mCavPor4.1

      Range
      75702903..75742833
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063259451.1 → XP_063115521.1  NGFI-A-binding protein 1 isoform X2

    2. XM_063259450.1 → XP_063115520.1  NGFI-A-binding protein 1 isoform X1

    3. XM_063259452.1 → XP_063115522.1  NGFI-A-binding protein 1 isoform X3

    Nucleotide Protein
    Heading Accession and Version

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