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    Prxl2b peroxiredoxin like 2B [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100733270, updated on 19-Jun-2024

    Summary

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    Gene symbol
    Prxl2b
    Gene description
    peroxiredoxin like 2B
    See related
    Ensembl:ENSCPOG00000026782
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Also known as
    Fam213b
    Orthologs
    human mouse all
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    Genomic context

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    See Prxl2b in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947508.1 (1131238..1133734)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176233.1 (288144..290697, complement)

    NW_026947508.1Genomic Context describing neighboring genes Neighboring gene hes family bHLH transcription factor 5 Neighboring gene TNF receptor superfamily member 14 Neighboring gene membrane metalloendopeptidase like 1 Neighboring gene tetratricopeptide repeat domain 34

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables prostaglandin F synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in prostaglandin biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    prostamide/prostaglandin F synthase
    Names
    family with sequence similarity 213 member B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947508.1 Reference mCavPor4.1

      Range
      1131238..1133734
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013152996.3 → XP_013008450.1  prostamide/prostaglandin F synthase

      See identical proteins and their annotated locations for XP_013008450.1

      UniProtKB/TrEMBL
      H0WBZ1
      Related
      ENSCPOP00000020510.1
      Conserved Domains (1) summary
      cd02970
      Location:8 → 167
      PRX_like2; Peroxiredoxin (PRX)-like 2 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a CXXC motif, similar to TRX. The second cysteine in the motif corresponds to the peroxidatic cysteine of PRX, however, these ...
    Nucleotide Protein
    Heading Accession and Version

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