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    Rab22a RAB22A, member RAS oncogene family [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100731614, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Rab22a
    Gene description
    RAB22A, member RAS oncogene family
    See related
    Ensembl:ENSCPOG00000008172
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    See Rab22a in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947488.1 (5775236..5843358, complement)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176263.1 (635176..703224)

    NW_026947488.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134475945 Neighboring gene APC down-regulated 1 like Neighboring gene VAMP associated protein B and C Neighboring gene uncharacterized LOC100735786 Neighboring gene serine/threonine-protein phosphatase 4 regulatory subunit 1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ras-related protein Rab-22A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947488.1 Reference mCavPor4.1

      Range
      5775236..5843358 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023567673.2 → XP_023423441.1  ras-related protein Rab-22A isoform X2

      Conserved Domains (1) summary
      cd01860
      Location:5 → 143
      Rab5_related; Rab-related GTPase family includes Rab5 and Rab22; regulates early endosome fusion

    2. XM_003462029.5 → XP_003462077.1  ras-related protein Rab-22A isoform X1

      UniProtKB/TrEMBL
      H0VBQ9
      Related
      ENSCPOP00000007348.2
      Conserved Domains (2) summary
      cd01860
      Location:5 → 167
      Rab5_related; Rab-related GTPase family includes Rab5 and Rab22; regulates early endosome fusion
      pfam00071
      Location:7 → 167
      Ras; Ras family
    Nucleotide Protein
    Heading Accession and Version

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