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    Sidt2 SID1 transmembrane family member 2 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100731389, updated on 3-Apr-2024

    Summary

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    Gene symbol
    Sidt2
    Gene description
    SID1 transmembrane family member 2
    See related
    Ensembl:ENSCPOG00000007005
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    See Sidt2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    26
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947492.1 (9435499..9450999)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176400.1 (30754990..30770436, complement)

    NW_026947492.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134477617 Neighboring gene uncharacterized LOC134477618 Neighboring gene platelet activating factor acetylhydrolase 1b catalytic subunit 2 Neighboring gene transgelin Neighboring gene proprotein convertase subtilisin/kexin type 7

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables double-stranded RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in RNA transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in lysosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SID1 transmembrane family member 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947492.1 Reference mCavPor4.1

      Range
      9435499..9450999
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003472668.5 → XP_003472716.2  SID1 transmembrane family member 2

      UniProtKB/TrEMBL
      A0A286XFF0, A0A286XM03
      Related
      ENSCPOP00000026513.1
      Conserved Domains (1) summary
      pfam13965
      Location:172 → 832
      SID-1_RNA_chan; dsRNA-gated channel SID-1

    RNA

    1. XR_010049655.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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