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    Wdr13 WD repeat domain 13 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100730690, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Wdr13
    Gene description
    WD repeat domain 13
    See related
    Ensembl:ENSCPOG00000005101
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    See Wdr13 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947486.1 (19997805..20008683)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176287.1 (1952876..1960680)

    NW_026947486.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA26 Neighboring gene RNA binding motif protein 3 Neighboring gene histone RNA hairpin-binding protein-like Neighboring gene U2 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables promoter-specific chromatin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    WD repeat-containing protein 13

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947486.1 Reference mCavPor4.1

      Range
      19997805..20008683
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003462558.5 → XP_003462606.1  WD repeat-containing protein 13

      UniProtKB/TrEMBL
      H0V4N8
      Related
      ENSCPOP00000004589.2
      Conserved Domains (3) summary
      COG2319
      Location:165 → 485
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:221 → 257
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:175 → 481
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    Nucleotide Protein
    Heading Accession and Version

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    Research Materials