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    St3gal4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100729178, updated on 10-Oct-2024

    Summary

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    Gene symbol
    St3gal4
    Gene description
    ST3 beta-galactoside alpha-2,3-sialyltransferase 4
    See related
    Ensembl:ENSCPOG00000005968
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    See St3gal4 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947492.1 (20410571..20450873)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176400.1 (19798957..19839203, complement)

    NW_026947492.1Genomic Context describing neighboring genes Neighboring gene TIR domain containing adaptor protein Neighboring gene uncharacterized LOC134477639 Neighboring gene decapping enzyme, scavenger Neighboring gene uncharacterized LOC134477640 Neighboring gene kirre like nephrin family adhesion molecule 3 Neighboring gene uncharacterized LOC134477641

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables beta-D-galactosyl-(1->3)-N-acetyl-beta-D-galactosaminide alpha-2,3- sialyltransferase IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables beta-galactoside (CMP) alpha-2,3-sialyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in glycolipid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947492.1 Reference mCavPor4.1

      Range
      20410571..20450873
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063256037.1 → XP_063112107.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X6

    2. XM_063256038.1 → XP_063112108.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X7

    3. XM_013155488.3 → XP_013010942.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X8

      UniProtKB/TrEMBL
      H0V6Q9
      Related
      ENSCPOP00000005387.3
      Conserved Domains (1) summary
      pfam00777
      Location:120 → 367
      Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

    4. XM_063256039.1 → XP_063112109.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X9

    5. XM_013155490.3 → XP_013010944.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X1

      See identical proteins and their annotated locations for XP_013010944.1

      Conserved Domains (1) summary
      pfam00777
      Location:99 → 346
      Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

    6. XM_063256048.1 → XP_063112118.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X4

      UniProtKB/TrEMBL
      A0A286XA44

    7. XM_063256045.1 → XP_063112115.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X3

      UniProtKB/TrEMBL
      A0A286XTP3

    8. XM_063256040.1 → XP_063112110.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X1

    9. XM_063256044.1 → XP_063112114.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X3

      UniProtKB/TrEMBL
      A0A286XTP3

    10. XM_063256043.1 → XP_063112113.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X3

      UniProtKB/TrEMBL
      A0A286XTP3

    11. XM_013155489.2 → XP_013010943.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X1

      See identical proteins and their annotated locations for XP_013010943.1

      Conserved Domains (1) summary
      pfam00777
      Location:99 → 346
      Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

    12. XM_063256042.1 → XP_063112112.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X3

      UniProtKB/TrEMBL
      A0A286XTP3

    13. XM_063256047.1 → XP_063112117.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X4

      UniProtKB/TrEMBL
      A0A286XA44

    14. XM_063256036.1 → XP_063112106.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X5

    15. XM_023566171.2 → XP_023421939.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X4

      UniProtKB/TrEMBL
      A0A286XA44
      Related
      ENSCPOP00000022303.1
      Conserved Domains (1) summary
      pfam00777
      Location:87 → 331
      Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

    16. XM_023566170.2 → XP_023421938.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X3

      UniProtKB/TrEMBL
      A0A286XTP3
      Related
      ENSCPOP00000028720.1
      Conserved Domains (1) summary
      pfam00777
      Location:94 → 338
      Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

    17. XM_063256034.1 → XP_063112104.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X1

    18. XM_023566169.2 → XP_023421937.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X2

      Conserved Domains (1) summary
      pfam00777
      Location:95 → 339
      Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

    19. XM_063256046.1 → XP_063112116.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X3

      UniProtKB/TrEMBL
      A0A286XTP3

    20. XM_063256041.1 → XP_063112111.1  CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 isoform X1

    RNA

    1. XR_010049721.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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