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    Cep43 centrosomal protein 43 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100728960, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Cep43
    Gene description
    centrosomal protein 43
    See related
    Ensembl:ENSCPOG00000036620
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Also known as
    Fgfr1op
    Orthologs
    human mouse all
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    Genomic context

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    See Cep43 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947505.1 (36133018..36165117, complement)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176359.1 (4171303..4202558, complement)

    NW_026947505.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134472109 Neighboring gene C-C motif chemokine receptor 6 Neighboring gene uncharacterized LOC134472110 Neighboring gene anoctamin-5-like Neighboring gene ribonuclease T2 Neighboring gene mitochondrial pyruvate carrier 1 Neighboring gene ribosomal protein S6 kinase A2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in microtubule anchoring IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centrosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    centrosomal protein 43
    Names
    FGFR1 oncogene partner

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947505.1 Reference mCavPor4.1

      Range
      36133018..36165117 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003466370.5 → XP_003466418.3  centrosomal protein 43 isoform X2

    2. XM_013148870.3 → XP_013004324.2  centrosomal protein 43 isoform X4

    3. XM_013148869.3 → XP_013004323.2  centrosomal protein 43 isoform X3

    4. XM_023563598.2 → XP_023419366.2  centrosomal protein 43 isoform X1

    5. XM_003466371.5 → XP_003466419.3  centrosomal protein 43 isoform X5

    Nucleotide Protein
    Heading Accession and Version

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