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    Cnot8 CCR4-NOT transcription complex subunit 8 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100728895, updated on 11-Apr-2024

    Summary

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    Gene symbol
    Cnot8
    Gene description
    CCR4-NOT transcription complex subunit 8
    See related
    Ensembl:ENSCPOG00000003466
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    See Cnot8 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947502.1 (9789309..9809959)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176402.1 (1734552..1754061)

    NW_026947502.1Genomic Context describing neighboring genes Neighboring gene La ribonucleoprotein 1, translational regulator Neighboring gene small nucleolar RNA SNORA2/SNORA34 family Neighboring gene fatty acid hydroxylase domain containing 2 Neighboring gene gem nuclear organelle associated protein 5 Neighboring gene U6 spliceosomal RNA Neighboring gene mitochondrial ribosomal protein L22

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables poly(A)-specific ribonuclease activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of CCR4-NOT complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of CCR4-NOT core complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in P-body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    CCR4-NOT transcription complex subunit 8

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947502.1 Reference mCavPor4.1

      Range
      9789309..9809959
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063230696.1 → XP_063086766.1  CCR4-NOT transcription complex subunit 8 isoform X1

      UniProtKB/TrEMBL
      H0V0X9

    2. XM_013156206.3 → XP_013011660.1  CCR4-NOT transcription complex subunit 8 isoform X2

      Conserved Domains (1) summary
      cl23804
      Location:1 → 257
      CAF1; CAF1 family ribonuclease

    3. XM_003473222.4 → XP_003473270.1  CCR4-NOT transcription complex subunit 8 isoform X1

      See identical proteins and their annotated locations for XP_003473270.1

      UniProtKB/TrEMBL
      H0V0X9
      Related
      ENSCPOP00000003131.2
      Conserved Domains (1) summary
      cl23804
      Location:1 → 286
      CAF1; CAF1 family ribonuclease

    4. XM_063230695.1 → XP_063086765.1  CCR4-NOT transcription complex subunit 8 isoform X1

      UniProtKB/TrEMBL
      H0V0X9
    Nucleotide Protein
    Heading Accession and Version

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