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    Pigv phosphatidylinositol glycan anchor biosynthesis class V [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100727680, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Pigv
    Gene description
    phosphatidylinositol glycan anchor biosynthesis class V
    See related
    Ensembl:ENSCPOG00000033509
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    See Pigv in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947508.1 (20304667..20316899)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176394.1 (9393716..9405132, complement)

    NW_026947508.1Genomic Context describing neighboring genes Neighboring gene spermine synthase-like Neighboring gene AT-rich interaction domain 1A Neighboring gene methylosome subunit pICln-like Neighboring gene zinc finger DHHC-type palmitoyltransferase 18

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables alpha-1,6-mannosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables glycolipid mannosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in GPI anchor biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of mannosyltransferase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    GPI mannosyltransferase 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947508.1 Reference mCavPor4.1

      Range
      20304667..20316899
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063235840.1 → XP_063091910.1  GPI mannosyltransferase 2 isoform X4

    2. XM_063235825.1 → XP_063091895.1  GPI mannosyltransferase 2 isoform X1

    3. XM_063235839.1 → XP_063091909.1  GPI mannosyltransferase 2 isoform X3

    4. XM_063235828.1 → XP_063091898.1  GPI mannosyltransferase 2 isoform X2

    5. XM_063235827.1 → XP_063091897.1  GPI mannosyltransferase 2 isoform X2

    6. XM_023565680.2 → XP_023421448.1  GPI mannosyltransferase 2 isoform X2

      Conserved Domains (1) summary
      pfam04188
      Location:8 → 493
      Mannosyl_trans2; Mannosyltransferase (PIG-V)

    7. XM_063235829.1 → XP_063091899.1  GPI mannosyltransferase 2 isoform X2

    8. XM_063235830.1 → XP_063091900.1  GPI mannosyltransferase 2 isoform X2

    9. XM_063235826.1 → XP_063091896.1  GPI mannosyltransferase 2 isoform X2

    10. XM_063235832.1 → XP_063091902.1  GPI mannosyltransferase 2 isoform X2

    11. XM_013154111.3 → XP_013009565.1  GPI mannosyltransferase 2 isoform X2

      See identical proteins and their annotated locations for XP_013009565.1

      Conserved Domains (1) summary
      pfam04188
      Location:8 → 493
      Mannosyl_trans2; Mannosyltransferase (PIG-V)

    12. XM_063235835.1 → XP_063091905.1  GPI mannosyltransferase 2 isoform X2

    13. XM_063235833.1 → XP_063091903.1  GPI mannosyltransferase 2 isoform X2

    14. XM_063235836.1 → XP_063091906.1  GPI mannosyltransferase 2 isoform X2

    15. XM_063235831.1 → XP_063091901.1  GPI mannosyltransferase 2 isoform X2

    16. XM_063235838.1 → XP_063091908.1  GPI mannosyltransferase 2 isoform X2

    17. XM_023565681.2 → XP_023421449.1  GPI mannosyltransferase 2 isoform X2

      Conserved Domains (1) summary
      pfam04188
      Location:8 → 493
      Mannosyl_trans2; Mannosyltransferase (PIG-V)

    18. XM_063235837.1 → XP_063091907.1  GPI mannosyltransferase 2 isoform X2

    19. XM_063235834.1 → XP_063091904.1  GPI mannosyltransferase 2 isoform X2

    20. XM_013154112.3 → XP_013009566.1  GPI mannosyltransferase 2 isoform X2

      See identical proteins and their annotated locations for XP_013009566.1

      Conserved Domains (1) summary
      pfam04188
      Location:8 → 493
      Mannosyl_trans2; Mannosyltransferase (PIG-V)

    RNA

    1. XR_010043033.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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