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    Slc3a1 solute carrier family 3 member 1 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100726402, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Slc3a1
    Gene description
    solute carrier family 3 member 1
    See related
    Ensembl:ENSCPOG00000009505
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    See Slc3a1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947484.1 (214535906..214585574, complement)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176401.1 (28358429..28401124)

    NW_026947484.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134474448 Neighboring gene calmodulin-lysine N-methyltransferase Neighboring gene small nucleolar RNA SNORA2/SNORA34 family Neighboring gene prolyl endopeptidase like Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1B Neighboring gene uncharacterized LOC134471159

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in amino acid transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    amino acid transporter heavy chain SLC3A1
    Names
    solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947484.1 Reference mCavPor4.1

      Range
      214535906..214585574 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003472929.5 → XP_003472977.1  amino acid transporter heavy chain SLC3A1

      UniProtKB/TrEMBL
      H0VES4
      Related
      ENSCPOP00000008532.3
      Conserved Domains (3) summary
      cd11359
      Location:116 → 569
      AmyAc_SLC3A1; Alpha amylase catalytic domain found in Solute Carrier family 3 member 1 proteins
      TIGR02403
      Location:117 → 609
      trehalose_treC; alpha,alpha-phosphotrehalase
      pfam16028
      Location:65 → 122
      SLC3A2_N; Solute carrier family 3 member 2 N-terminus
    Nucleotide Protein
    Heading Accession and Version

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