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    Popdc1 popeye domain cAMP effector 1 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100726176, updated on 21-Sep-2024

    Summary

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    Gene symbol
    Popdc1
    Gene description
    popeye domain cAMP effector 1
    See related
    Ensembl:ENSCPOG00000034314
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Also known as
    Bves
    Orthologs
    human mouse all
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    Genomic context

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    See Popdc1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947490.1 (93416351..93450118, complement)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176356.1 (5046938..5080739, complement)

    NW_026947490.1Genomic Context describing neighboring genes Neighboring gene HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 Neighboring gene lin-28 homolog B Neighboring gene uncharacterized LOC111755694 Neighboring gene popeye domain cAMP effector 3 Neighboring gene G patch domain-containing protein 2-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cAMP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in heart development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of membrane potential IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in skeletal muscle tissue development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in striated muscle cell differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in sarcolemma IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    blood vessel epicardial substance

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947490.1 Reference mCavPor4.1

      Range
      93416351..93450118 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003466005.5 → XP_003466053.1  blood vessel epicardial substance isoform X2

      UniProtKB/TrEMBL
      A0A286XRM3
      Related
      ENSCPOP00000028133.1
      Conserved Domains (1) summary
      pfam04831
      Location:39 → 266
      Popeye; Popeye protein conserved region

    2. XM_063253947.1 → XP_063110017.1  blood vessel epicardial substance isoform X1

    Nucleotide Protein
    Heading Accession and Version

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