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    Cmtr1 cap methyltransferase 1 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100725670, updated on 11-Apr-2024

    Summary

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    Gene symbol
    Cmtr1
    Gene description
    cap methyltransferase 1
    See related
    Ensembl:ENSCPOG00000010298
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Also known as
    Ftsjd2
    Orthologs
    human mouse all
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    Genomic context

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    See Cmtr1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947511.1 (43466550..43506875)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176404.1 (34485244..34524652)

    NW_026947511.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 8 Neighboring gene uncharacterized LOC134473706 Neighboring gene uncharacterized LOC134473707 Neighboring gene uncharacterized LOC134473709 Neighboring gene coiled-coil domain containing 167 Neighboring gene uncharacterized LOC134473832

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA (nucleoside-2'-O-)-methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in 7-methylguanosine mRNA capping IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1
    Names
    FtsJ methyltransferase domain containing 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947511.1 Reference mCavPor4.1

      Range
      43466550..43506875
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003473675.5 → XP_003473723.1  cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1

      UniProtKB/TrEMBL
      H0VGK4
      Related
      ENSCPOP00000009248.2
      Conserved Domains (3) summary
      pfam01585
      Location:87 → 129
      G-patch; G-patch domain
      pfam01728
      Location:232 → 448
      FtsJ; FtsJ-like methyltransferase
      cl12015
      Location:623 → 740
      Adenylation_DNA_ligase_like; Adenylation domain of proteins similar to ATP-dependent polynucleotide ligases
    Nucleotide Protein
    Heading Accession and Version

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