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    Rragb Ras related GTP binding B [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100724885, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Rragb
    Gene description
    Ras related GTP binding B
    See related
    Ensembl:ENSCPOG00000011266
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    See Rragb in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947486.1 (27484722..27560004)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176249.1 (1211496..1254847, complement)

    NW_026947486.1Genomic Context describing neighboring genes Neighboring gene 5'-aminolevulinate synthase 2 Neighboring gene protein VCF1-like Neighboring gene protein VCF1-like Neighboring gene uncharacterized LOC134475442 Neighboring gene uncharacterized LOC111757737

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cellular response to starvation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of autophagy IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Gtr1-Gtr2 GTPase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in lysosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ras-related GTP-binding protein B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947486.1 Reference mCavPor4.1

      Range
      27484722..27560004
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063245980.1 → XP_063102050.1  ras-related GTP-binding protein B isoform X5

    2. XM_063245982.1 → XP_063102052.1  ras-related GTP-binding protein B isoform X7

    3. XM_063245976.1 → XP_063102046.1  ras-related GTP-binding protein B isoform X2

    4. XM_063245977.1 → XP_063102047.1  ras-related GTP-binding protein B isoform X2

    5. XM_063245975.1 → XP_063102045.1  ras-related GTP-binding protein B isoform X1

    6. XM_063245979.1 → XP_063102049.1  ras-related GTP-binding protein B isoform X4

    7. XM_063245978.1 → XP_063102048.1  ras-related GTP-binding protein B isoform X3

    8. XM_063245981.1 → XP_063102051.1  ras-related GTP-binding protein B isoform X6

    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases
    Research Materials