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    Slc35c1 solute carrier family 35 member C1 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100724079, updated on 10-Oct-2024

    Summary

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    Gene symbol
    Slc35c1
    Gene description
    solute carrier family 35 member C1
    See related
    Ensembl:ENSCPOG00000037302
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    See Slc35c1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947500.1 (42486775..42494759)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176347.1 (5369015..5377882)

    NW_026947500.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134470945 Neighboring gene uncharacterized LOC134470946 Neighboring gene cryptochrome circadian regulator 2 Neighboring gene mitogen-activated protein kinase 8 interacting protein 1 Neighboring gene Frey regulator of sperm-oocyte fusion 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GDP-fucose transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables antiporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in GDP-fucose import into Golgi lumen IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein O-linked fucosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    GDP-fucose transporter 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947500.1 Reference mCavPor4.1

      Range
      42486775..42494759
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063227820.1 → XP_063083890.1  GDP-fucose transporter 1 isoform X2

    2. XM_063227821.1 → XP_063083891.1  GDP-fucose transporter 1 isoform X2

    3. XM_063227819.1 → XP_063083889.1  GDP-fucose transporter 1 isoform X2

    4. XM_063227818.1 → XP_063083888.1  GDP-fucose transporter 1 isoform X1

    5. XM_003465138.5 → XP_003465186.1  GDP-fucose transporter 1 isoform X3

      UniProtKB/TrEMBL
      A0A286Y1A0
      Conserved Domains (1) summary
      pfam03151
      Location:40 → 323
      TPT; Triose-phosphate Transporter family
    Nucleotide Protein
    Heading Accession and Version

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