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    Slc1a4 solute carrier family 1 member 4 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100724004, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Slc1a4
    Gene description
    solute carrier family 1 member 4
    See related
    Ensembl:ENSCPOG00000008754
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    See Slc1a4 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947501.1 (19652337..19677545)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176371.1 (450793..476019, complement)

    NW_026947501.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134471284 Neighboring gene uncharacterized LOC134471283 Neighboring gene uncharacterized LOC134471485 Neighboring gene splicing factor 45-like Neighboring gene uncharacterized LOC134471286 Neighboring gene small nucleolar RNA SNORA2/SNORA34 family

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables L-alanine transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables L-aspartate transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables L-serine transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables L-threonine transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables symporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in L-glutamate transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in L-serine transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    neutral amino acid transporter A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947501.1 Reference mCavPor4.1

      Range
      19652337..19677545
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003467469.5 → XP_003467517.1  neutral amino acid transporter A

      UniProtKB/TrEMBL
      H0VD21
      Related
      ENSCPOP00000007859.3
      Conserved Domains (1) summary
      pfam00375
      Location:72 → 477
      SDF; Sodium:dicarboxylate symporter family
    Nucleotide Protein
    Heading Accession and Version

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